RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 C20orf24Q9BUV8 137 aa11.21□□□□□ -0.61
USB1-207ENST00000563149 NCKAP5O14513 1909 aa11.21□□□□□ -0.62
USB1-207ENST00000563149 WRBO00258 174 aa11.21□□□□□ -0.62
USB1-207ENST00000563149 SRP19P09132 144 aaKnown RBP11.21□□□□□ -0.62
USB1-207ENST00000563149 GPM6AP51674 278 aa11.21□□□□□ -0.62
USB1-207ENST00000563149 HERPUD1Q15011 391 aa11.21□□□□□ -0.62
USB1-207ENST00000563149 ZNF506Q5JVG8 444 aa11.21□□□□□ -0.62
USB1-207ENST00000563149 ZNF880Q6PDB4 577 aa11.21□□□□□ -0.62
USB1-207ENST00000563149 C6orf15Q6UXA7 325 aaPredicted RBP11.21□□□□□ -0.62
USB1-207ENST00000563149 ODF3L1Q8IXM7 274 aa11.21□□□□□ -0.62
USB1-207ENST00000563149 FAM24BQ8N5W8 94 aa11.21□□□□□ -0.62
USB1-207ENST00000563149 ZFP62Q8NB50 900 aaPredicted RBP11.21□□□□□ -0.62
USB1-207ENST00000563149 SUMF1Q8NBK3 374 aa11.21□□□□□ -0.62
USB1-207ENST00000563149 TCTEX1D2Q8WW35 142 aa11.21□□□□□ -0.62
USB1-207ENST00000563149 YPEL4Q96NS1 127 aa11.21□□□□□ -0.62
USB1-207ENST00000563149 ATP5SQ99766 215 aa11.21□□□□□ -0.62
USB1-207ENST00000563149 FAM173AQ9BQD7 235 aa11.21□□□□□ -0.62
USB1-207ENST00000563149 ZPBPQ9BS86 351 aa11.21□□□□□ -0.62
USB1-207ENST00000563149 FGF23Q9GZV9 251 aaPredicted RBP11.21□□□□□ -0.62
USB1-207ENST00000563149 CCL28Q9NRJ3 127 aa11.21□□□□□ -0.62
USB1-207ENST00000563149 MTCH1Q9NZJ7 389 aa11.21□□□□□ -0.62
USB1-207ENST00000563149 TNRC6AQ8NDV7 1962 aaKnown RBP11.2□□□□□ -0.62
USB1-207ENST00000563149 CEP290O15078 2479 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 IGKV1D-13A0A0B4J2D9 117 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 A0A1B0GU03 582 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 PINLYPA6NC86 204 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 AP4M1O00189 453 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 PGLYRP1O75594 196 aaPredicted RBP11.2□□□□□ -0.62
USB1-207ENST00000563149 OR2C1O95371 312 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 SYNGR4O95473 234 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 IGKV1-13P0DP09 117 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 TDGF1P13385 188 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 DAOP14920 347 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 F2RP25116 425 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 TAS2R30P59541 319 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 RPL23AP62750 156 aaKnown RBP11.2□□□□□ -0.62
USB1-207ENST00000563149 FABP9Q0Z7S8 132 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 AKR1C8PQ5T2L2 129 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 NEK7Q8TDX7 302 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 RARRES2Q99969 163 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 GLRX2Q9NS18 164 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 RNF115Q9Y4L5 304 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 MPC1Q9Y5U8 109 aa11.2□□□□□ -0.62
USB1-207ENST00000563149 TRAV1-1A0A0B4J248 108 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 A0A1W2PPE2 198 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 C5orf49A4QMS7 147 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 HSD17B6O14756 317 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 GPR37O15354 613 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 CHST1O43916 411 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 ARG1P05089 322 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 LHX2P50458 406 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 ASCL1P50553 236 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 RPS23P62266 143 aaKnown RBP11.19□□□□□ -0.62
USB1-207ENST00000563149 RPS18P62269 152 aaKnown RBP11.19□□□□□ -0.62
USB1-207ENST00000563149 CCL20P78556 96 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 KHDC3LQ587J8 217 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 ADAM5Q6NVV9 412 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 PCSK4Q6UW60 755 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 HEPN1Q6WQI6 88 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 ZNF573Q86YE8 665 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 OR10G4Q8NGN3 311 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 MRPL30Q8TCC3 161 aaKnown RBP11.19□□□□□ -0.62
USB1-207ENST00000563149 CT55Q8WUE5 264 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 TCEAL3Q969E4 200 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 RAB40CQ96S21 281 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 CABLES2Q9BTV7 478 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 MAGT1Q9H0U3 335 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 SIRT7Q9NRC8 400 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 LRFN1Q9P244 771 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 B4GALT7Q9UBV7 327 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 OR2W1Q9Y3N9 320 aa11.19□□□□□ -0.62
USB1-207ENST00000563149 PUS1Q9Y606 427 aaKnown RBP eCLIP11.19□□□□□ -0.62
USB1-207ENST00000563149 IGKV1-6A0A0C4DH72 117 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 A0A1W2PPE3 182 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 CXorf65A6NEN9 183 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 OR5B21A6NL26 309 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 SCAF4O95104 1147 aaKnown RBP11.18□□□□□ -0.62
USB1-207ENST00000563149 ZNF806P0C7X5 589 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 CCNOP22674 350 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 OMGP23515 440 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 PAX9P55771 341 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 HLA-DRB3P79483 266 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 PLP2Q04941 152 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 ZNF324BQ6AW86 544 aaPredicted RBP11.18□□□□□ -0.62
USB1-207ENST00000563149 TCEAL6Q6IPX3 200 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 STX12Q86Y82 276 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 OR2M7Q8NG81 312 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 MAFAQ8NHW3 353 aaPredicted RBP11.18□□□□□ -0.62
USB1-207ENST00000563149 NANPQ8TBE9 248 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 OR5P3Q8WZ94 311 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 PSMF1Q92530 271 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 MUCL1Q96DR8 90 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 ABHD14AQ9BUJ0 271 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 PKIBQ9C010 78 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 PRDM6Q9NQX0 595 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 hCG_1809904A0A1W2PP81 198 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 A0A1W2PR64 198 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 A0A1W2PRV1 198 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 CDRT15L2A8MXV6 281 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 NPIPB11E5RHQ5 1161 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms