RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 OR6C3Q9NZP0 311 aa10.5□□□□□ -0.73
CDH11-204ENST00000562712 CCDC59Q9P031 241 aaKnown RBP10.5□□□□□ -0.73
CDH11-204ENST00000562712 UBE2J1Q9Y385 318 aaPredicted RBP10.5□□□□□ -0.73
CDH11-204ENST00000562712 AUP1Q9Y679 476 aa10.5□□□□□ -0.73
CDH11-204ENST00000562712 LINC00312Q9Y6C7 94 aa10.5□□□□□ -0.73
CDH11-204ENST00000562712 MEIKINA0A087WXM9 373 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 TRGV10A0A0A0MS01 117 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 hCG_1809904A0A1W2PP81 198 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 A0A1W2PPE2 198 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 A0A1W2PR64 198 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 A0A1W2PRV1 198 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 TMEM30CPA0ZSE6 113 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 UBE2QL1A1L167 161 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 POM121CA8CG34 1229 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 M0R1W7 72 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 ZNF728P0DKX0 622 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 GZMHP20718 246 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 ARF6P62330 175 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 ARL6IP1Q15041 203 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 MOGAT2Q3SYC2 334 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 PLAC9Q5JTB6 97 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 UBE2NLQ5JXB2 153 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 METTL11BQ5VVY1 283 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 TPRX1Q8N7U7 411 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 SAMD12Q8N8I0 201 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 PLPPR1Q8TBJ4 325 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 PHF21AQ96BD5 680 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 SLC25A38Q96DW6 304 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 S100A16Q96FQ6 103 aaKnown RBP10.49□□□□□ -0.73
CDH11-204ENST00000562712 WDFY2Q96P53 400 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 PECRQ9BY49 303 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 RIMS4Q9H426 269 aaPredicted RBP10.49□□□□□ -0.73
CDH11-204ENST00000562712 ETAA1Q9NY74 926 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 TAS2R3Q9NYW6 316 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 COMMD3Q9UBI1 195 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 OPN4Q9UHM6 478 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 KIF25Q9UIL4 384 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 ARHGAP32A7KAX9 2087 aa10.49□□□□□ -0.73
CDH11-204ENST00000562712 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.49□□□□□ -0.73
CDH11-204ENST00000562712 C17orf98A8MV24 154 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 TOX4O94842 621 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 APOA1P02647 267 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 RBP4P02753 201 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 CGB3P0DN86 165 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 CGB7P0DN87 165 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 MMP9P14780 707 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 DLX6P56179 175 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 ZNF273Q14593 569 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 TCF23Q7RTU1 214 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 C11orf42Q8N5U0 333 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 TEX29Q8N6K0 151 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 Q8N7P7 452 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 ZNF714Q96N38 554 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 SIRPDQ9H106 197 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 METTL8Q9H825 291 aaKnown RBP10.48□□□□□ -0.73
CDH11-204ENST00000562712 LINC00574Q9H8X3 128 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 UNKLQ9H9P5 680 aaKnown RBP10.48□□□□□ -0.73
CDH11-204ENST00000562712 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.48□□□□□ -0.73
CDH11-204ENST00000562712 DIABLOQ9NR28 239 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 ING3Q9NXR8 418 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 ONECUT1Q9UBC0 465 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 KCNK7Q9Y2U2 307 aa10.48□□□□□ -0.73
CDH11-204ENST00000562712 ATRQ13535 2644 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 A6NHS1 94 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 SERPINE3A8MV23 424 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 INAFM1C9JVW0 142 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 XRCC3O43542 346 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 NAPSAO96009 420 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 AVPP01185 164 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 HIST1H1DP16402 221 aaKnown RBP10.47□□□□□ -0.73
CDH11-204ENST00000562712 GNB3P16520 340 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 PRTN3P24158 256 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 CDNFQ49AH0 187 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 FAM120AOSQ5T036 256 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 C1orf229Q6ZS94 237 aaPredicted RBP10.47□□□□□ -0.73
CDH11-204ENST00000562712 TRAPPC6BQ86SZ2 158 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 DYRK2Q92630 601 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 UPRTQ96BW1 309 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 SLIRPQ9GZT3 109 aaKnown RBP10.47□□□□□ -0.73
CDH11-204ENST00000562712 NXF2Q9GZY0 626 aaKnown RBP10.47□□□□□ -0.73
CDH11-204ENST00000562712 GAL3ST2Q9H3Q3 398 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 BATF3Q9NR55 127 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 AK3Q9UIJ7 227 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 DNHD1Q96M86 4753 aa10.47□□□□□ -0.73
CDH11-204ENST00000562712 A0A075B6Q4 140 aa10.46□□□□□ -0.73
CDH11-204ENST00000562712 TRBV6-6A0A0A6YYG2 114 aa10.46□□□□□ -0.73
CDH11-204ENST00000562712 KBTBD11-OT1A0A1B0GTJ5 212 aa10.46□□□□□ -0.73
CDH11-204ENST00000562712 ZNF729A6NN14 1252 aaPredicted RBP10.46□□□□□ -0.73
CDH11-204ENST00000562712 MFNGO00587 321 aa10.46□□□□□ -0.73
CDH11-204ENST00000562712 ORC5O43913 435 aa10.46□□□□□ -0.73
CDH11-204ENST00000562712 HPGDSO60760 199 aa10.46□□□□□ -0.73
CDH11-204ENST00000562712 GSTP1P09211 210 aaKnown RBP10.46□□□□□ -0.73
CDH11-204ENST00000562712 CCL3L1P16619 93 aa10.46□□□□□ -0.73
CDH11-204ENST00000562712 CDK2P24941 298 aa10.46□□□□□ -0.73
CDH11-204ENST00000562712 ZNF260Q3ZCT1 412 aa10.46□□□□□ -0.73
CDH11-204ENST00000562712 FOXB2Q5VYV0 432 aa10.46□□□□□ -0.73
CDH11-204ENST00000562712 TRAT1Q6PIZ9 186 aa10.46□□□□□ -0.73
CDH11-204ENST00000562712 ZNF554Q86TJ5 538 aa10.46□□□□□ -0.73
CDH11-204ENST00000562712 RTN4RL2Q86UN3 420 aa10.46□□□□□ -0.73
CDH11-204ENST00000562712 OR13A1Q8NGR1 328 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms