RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ZNF782Q6ZMW2 699 aaPredicted RBP8.01□□□□□ -1.13
CLK3-208ENST00000562626 GAPTQ8N292 157 aa8.01□□□□□ -1.13
CLK3-208ENST00000562626 OR5D13Q8NGL4 314 aa8.01□□□□□ -1.13
CLK3-208ENST00000562626 MRPL30Q8TCC3 161 aaKnown RBP8.01□□□□□ -1.13
CLK3-208ENST00000562626 CCDC107Q8WV48 283 aa8.01□□□□□ -1.13
CLK3-208ENST00000562626 C22orf15Q8WYQ4 148 aa8.01□□□□□ -1.13
CLK3-208ENST00000562626 LHX4Q969G2 390 aa8.01□□□□□ -1.13
CLK3-208ENST00000562626 SLC25A46Q96AG3 418 aa8.01□□□□□ -1.13
CLK3-208ENST00000562626 ARHGAP5-AS1Q96IT6 56 aa8.01□□□□□ -1.13
CLK3-208ENST00000562626 FAAP24Q9BTP7 215 aa8.01□□□□□ -1.13
CLK3-208ENST00000562626 DCSTAMPQ9H295 470 aa8.01□□□□□ -1.13
CLK3-208ENST00000562626 ZNF69Q9UC07 566 aa8.01□□□□□ -1.13
CLK3-208ENST00000562626 MEIKINA0A087WXM9 373 aa8□□□□□ -1.13
CLK3-208ENST00000562626 MDFIC2A0A1B0GVS7 189 aa8□□□□□ -1.13
CLK3-208ENST00000562626 A0A1W2PRD5 423 aa8□□□□□ -1.13
CLK3-208ENST00000562626 A0A1W2PRF3 423 aa8□□□□□ -1.13
CLK3-208ENST00000562626 A0A1W2PRM7 423 aa8□□□□□ -1.13
CLK3-208ENST00000562626 MT-ND4P03905 459 aa8□□□□□ -1.13
CLK3-208ENST00000562626 ZNF728P0DKX0 622 aa8□□□□□ -1.13
CLK3-208ENST00000562626 FUT3P21217 361 aa8□□□□□ -1.13
CLK3-208ENST00000562626 OMGP23515 440 aa8□□□□□ -1.13
CLK3-208ENST00000562626 PAX6P26367 422 aa8□□□□□ -1.13
CLK3-208ENST00000562626 BLVRBP30043 206 aaPredicted RBP8□□□□□ -1.13
CLK3-208ENST00000562626 SSTR5P35346 364 aa8□□□□□ -1.13
CLK3-208ENST00000562626 GLP1RP43220 463 aa8□□□□□ -1.13
CLK3-208ENST00000562626 SRSF2Q01130 221 aaKnown RBP8□□□□□ -1.13
CLK3-208ENST00000562626 PAX5Q02548 391 aa8□□□□□ -1.13
CLK3-208ENST00000562626 TUSC1Q2TAM9 212 aa8□□□□□ -1.13
CLK3-208ENST00000562626 LDLRAD2Q5SZI1 272 aa8□□□□□ -1.13
CLK3-208ENST00000562626 PRAMEF5Q5TYX0 476 aa8□□□□□ -1.13
CLK3-208ENST00000562626 SLC35E4Q6ICL7 350 aa8□□□□□ -1.13
CLK3-208ENST00000562626 ZNF497Q6ZNH5 498 aa8□□□□□ -1.13
CLK3-208ENST00000562626 PIP4P2Q8N4L2 257 aa8□□□□□ -1.13
CLK3-208ENST00000562626 KIR3DL3Q8N743 410 aa8□□□□□ -1.13
CLK3-208ENST00000562626 DTX3Q8N9I9 347 aa8□□□□□ -1.13
CLK3-208ENST00000562626 OR4K15Q8NH41 348 aa8□□□□□ -1.13
CLK3-208ENST00000562626 PPP1R35Q8TAP8 253 aa8□□□□□ -1.13
CLK3-208ENST00000562626 MRGPRDQ8TDS7 321 aa8□□□□□ -1.13
CLK3-208ENST00000562626 NEK7Q8TDX7 302 aa8□□□□□ -1.13
CLK3-208ENST00000562626 C17orf50Q8WW18 174 aa8□□□□□ -1.13
CLK3-208ENST00000562626 CORO2AQ92828 525 aa8□□□□□ -1.13
CLK3-208ENST00000562626 ZNF48Q96MX3 618 aaPredicted RBP8□□□□□ -1.13
CLK3-208ENST00000562626 ZNF714Q96N38 554 aa8□□□□□ -1.13
CLK3-208ENST00000562626 MRI1Q9BV20 369 aa8□□□□□ -1.13
CLK3-208ENST00000562626 BEX2Q9BXY8 128 aa8□□□□□ -1.13
CLK3-208ENST00000562626 PECRQ9BY49 303 aa8□□□□□ -1.13
CLK3-208ENST00000562626 ZMAT3Q9HA38 289 aaKnown RBP8□□□□□ -1.13
CLK3-208ENST00000562626 PCDHB16Q9NRJ7 776 aa8□□□□□ -1.13
CLK3-208ENST00000562626 AK3Q9UIJ7 227 aa8□□□□□ -1.13
CLK3-208ENST00000562626 RAB22AQ9UL26 194 aa8□□□□□ -1.13
CLK3-208ENST00000562626 KPTNQ9Y664 436 aa8□□□□□ -1.13
CLK3-208ENST00000562626 LINC00312Q9Y6C7 94 aa8□□□□□ -1.13
CLK3-208ENST00000562626 hADV38S2A0JD32 116 aa7.99□□□□□ -1.13
CLK3-208ENST00000562626 MCRIP1C9JLW8 97 aa7.99□□□□□ -1.13
CLK3-208ENST00000562626 H3BMQ9 156 aa7.99□□□□□ -1.13
CLK3-208ENST00000562626 C15orf65H3BRN8 121 aa7.99□□□□□ -1.13
CLK3-208ENST00000562626 M0R1W7 72 aa7.99□□□□□ -1.13
CLK3-208ENST00000562626 MFNGO00587 321 aa7.99□□□□□ -1.13
CLK3-208ENST00000562626 PTHLHP12272 177 aa7.99□□□□□ -1.13
CLK3-208ENST00000562626 RCC1P18754 421 aaPredicted RBP7.99□□□□□ -1.13
CLK3-208ENST00000562626 RAB6AP20340 208 aa7.99□□□□□ -1.13
CLK3-208ENST00000562626 MEF2CQ06413 473 aaPredicted RBP7.99□□□□□ -1.13
CLK3-208ENST00000562626 CHRFAM7AQ494W8 412 aa7.99□□□□□ -1.13
CLK3-208ENST00000562626 FOXB2Q5VYV0 432 aa7.99□□□□□ -1.13
CLK3-208ENST00000562626 TRAPPC6BQ86SZ2 158 aa7.99□□□□□ -1.13
CLK3-208ENST00000562626 ISOC1Q96CN7 298 aa7.99□□□□□ -1.13
CLK3-208ENST00000562626 AJUBAQ96IF1 538 aa7.99□□□□□ -1.13
CLK3-208ENST00000562626 RHBDL2Q9NX52 303 aa7.99□□□□□ -1.13
CLK3-208ENST00000562626 ETAA1Q9NY74 926 aa7.99□□□□□ -1.13
CLK3-208ENST00000562626 ZNRD1Q9P1U0 126 aa7.99□□□□□ -1.13
CLK3-208ENST00000562626 UBE2J1Q9Y385 318 aaPredicted RBP7.99□□□□□ -1.13
CLK3-208ENST00000562626 A0A075B6Q4 140 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 TMEM30CPA0ZSE6 113 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 CLPXO76031 633 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 NAPSAO96009 420 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 EIF4EP06730 217 aaKnown RBP7.98□□□□□ -1.13
CLK3-208ENST00000562626 IGHV1-8P0DP01 117 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 GNB3P16520 340 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 SRD5A1P18405 259 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 PRTN3P24158 256 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 COX7A1P24310 79 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 CDK2P24941 298 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 KCNJ3P48549 501 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 TMBIM6P55061 237 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 BLMHQ13867 455 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 USP43Q70EL4 1123 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 PRIMA1Q86XR5 153 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 IZUMO1Q8IYV9 350 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 CMTM4Q8IZR5 234 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 OR10R2Q8NGX6 335 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 RFESDQ8TAC1 157 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 NANPQ8TBE9 248 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 DYNC2LI1Q8TCX1 351 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 RAB2BQ8WUD1 216 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 PTX4Q96A99 478 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 DMRTB1Q96MA1 342 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 SLC6A7Q99884 636 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 URM1Q9BTM9 101 aaKnown RBP7.98□□□□□ -1.13
CLK3-208ENST00000562626 ATG5Q9H1Y0 275 aa7.98□□□□□ -1.13
CLK3-208ENST00000562626 UNKLQ9H9P5 680 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms