RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 PNMTP11086 282 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 OR3A4PP47883 348 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 FAM3BP58499 235 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 ENDOGQ14249 297 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 TSPO2Q5TGU0 170 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 LINC00346Q8IVM7 164 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 ZCCHC14Q8WYQ9 949 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 SLC35E1Q96K37 410 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 CENPMQ9NSP4 180 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 U3KQA8 63 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 FREM3P0C091 2139 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 IGSF23A1L1A6 192 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 SCRG1O75711 98 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 DUSP1P28562 367 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 GALR1P47211 349 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 ZNF41P51814 821 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 LPAL2Q16609 132 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 RIPPLY2Q5TAB7 128 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 CST9LP1Q5W188 147 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 DEFB123Q8N688 67 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 OR51G1Q8NGK1 321 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 OR5D14Q8NGL3 314 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 OR10S1Q8NGN2 331 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 KCNG3Q8TAE7 436 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 NCOR1P1Q9H4R4 102 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 AURKAIP1Q9NWT8 199 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 IGKV1D-8A0A087WSZ0 117 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 IGLV1-36A0A0B4J1U3 117 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 A0A1B0GUS0 222 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 RRP8O43159 456 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 TSPAN2O60636 221 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 KLF3P57682 345 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 FBXW4P57775 412 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 ACOT6Q3I5F7 207 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 ACTL10Q5JWF8 245 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 TMEM256Q8N2U0 113 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 SAP25Q8TEE9 199 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 TOMM40LQ969M1 308 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 OR5B12Q96R08 314 aa12.15□□□□□ -0.46
GTF3C1-203ENST00000562609 IGHV5-10-1A0A0J9YXX1 117 aa12.15□□□□□ -0.47
GTF3C1-203ENST00000562609 CNN1P51911 297 aaKnown RBP12.15□□□□□ -0.47
GTF3C1-203ENST00000562609 ZNF440Q8IYI8 595 aa12.15□□□□□ -0.47
GTF3C1-203ENST00000562609 OIT3Q8WWZ8 545 aa12.15□□□□□ -0.47
GTF3C1-203ENST00000562609 C1orf147Q96MC9 270 aaPredicted RBP12.15□□□□□ -0.47
GTF3C1-203ENST00000562609 GSX1Q9H4S2 264 aaPredicted RBP12.15□□□□□ -0.47
GTF3C1-203ENST00000562609 RNF150Q9ULK6 438 aa12.15□□□□□ -0.47
GTF3C1-203ENST00000562609 CBY3A6NI87 242 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 PITX3O75364 302 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 ONECUT2O95948 504 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 TMEM187Q14656 261 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 RHBDD2Q6NTF9 364 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 LGI3Q8N145 548 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 OR5C1Q8NGR4 320 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 ZNF665Q9H7R5 613 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 OCIAD1Q9NX40 245 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 ZNF581Q9P0T4 197 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 COA3Q9Y2R0 106 aaPredicted RBP12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 B3GALT1Q9Y5Z6 326 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 ADAMTS20P59510 1910 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 NUPR1O60356 82 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 NDUFB8O95169 186 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 BCL2P10415 239 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 TDGF1P13385 188 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 IL24Q13007 206 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 MMDQ15546 238 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 ACKR1Q16570 336 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 TMEM217Q8N7C4 229 aa12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 YLPM1P49750 1951 aaKnown RBP12.14□□□□□ -0.47
GTF3C1-203ENST00000562609 RALGAPA1Q6GYQ0 2036 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 TECTAO75443 2155 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 SHISA8B8ZZ34 492 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 H7BYZ3 331 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 K7EP13 123 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 ZNF205O95201 554 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 S100A7P31151 101 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 PMS2CLQ68D20 193 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 LYG1Q8N1E2 194 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 SUMF1Q8NBK3 374 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 OR51T1Q8NGJ9 327 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 GNPNAT1Q96EK6 184 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 CIB3Q96Q77 187 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 ALKBH7Q9BT30 221 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 CISD1Q9NZ45 108 aaKnown RBP12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 PILRBQ9UKJ0 227 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 VDAC3Q9Y277 283 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 ASPMQ8IZT6 3477 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 ALG1L2C9J202 215 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 TRAPPC6AO75865 159 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 CST7O76096 145 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 TTRP02766 147 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 ZNF92Q03936 586 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 TMEM183BQ1AE95 376 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 TMEM241Q24JQ0 296 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 DMRTC1Q5HYR2 192 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 RTN4IP1Q8WWV3 396 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 OR10A2Q9H208 303 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 NAA60Q9H7X0 242 aa12.13□□□□□ -0.47
GTF3C1-203ENST00000562609 ZNF732B4DXR9 585 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 OPN1LWP04000 364 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms