RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 PPP1R14BQ96C90 147 aa11.96□□□□□ -0.49
COMMD4-205ENST00000562310 MED30Q96HR3 178 aa11.96□□□□□ -0.49
COMMD4-205ENST00000562310 VRK1Q99986 396 aaPredicted RBP11.96□□□□□ -0.49
COMMD4-205ENST00000562310 TRAF4Q9BUZ4 470 aaPredicted RBP11.96□□□□□ -0.49
COMMD4-205ENST00000562310 FAM234AQ9H0X4 552 aa11.96□□□□□ -0.49
COMMD4-205ENST00000562310 ALX4Q9H161 411 aaPredicted RBP11.96□□□□□ -0.49
COMMD4-205ENST00000562310 NCOR1P1Q9H4R4 102 aa11.96□□□□□ -0.49
COMMD4-205ENST00000562310 ZNF665Q9H7R5 613 aa11.96□□□□□ -0.49
COMMD4-205ENST00000562310 MBNL3Q9NUK0 354 aaKnown RBP11.96□□□□□ -0.49
COMMD4-205ENST00000562310 TRAPPC2LQ9UL33 140 aa11.96□□□□□ -0.49
COMMD4-205ENST00000562310 PKDREJQ9NTG1 2253 aa11.96□□□□□ -0.49
COMMD4-205ENST00000562310 PPIAL4EA0A075B759 164 aa11.95□□□□□ -0.5
COMMD4-205ENST00000562310 PPIAL4DF5H284 164 aa11.95□□□□□ -0.5
COMMD4-205ENST00000562310 K7N7A8 449 aa11.95□□□□□ -0.5
COMMD4-205ENST00000562310 FSTL3O95633 263 aa11.95□□□□□ -0.5
COMMD4-205ENST00000562310 PPIAL4FP0DN26 164 aa11.95□□□□□ -0.5
COMMD4-205ENST00000562310 FPR2P25090 351 aa11.95□□□□□ -0.5
COMMD4-205ENST00000562310 TAS2R31P59538 309 aa11.95□□□□□ -0.5
COMMD4-205ENST00000562310 ATPAF1Q5TC12 328 aaPredicted RBP11.95□□□□□ -0.5
COMMD4-205ENST00000562310 OR5T2Q8NGG2 359 aa11.95□□□□□ -0.5
COMMD4-205ENST00000562310 CABLES2Q9BTV7 478 aa11.95□□□□□ -0.5
COMMD4-205ENST00000562310 DLL4Q9NR61 685 aa11.95□□□□□ -0.5
COMMD4-205ENST00000562310 KCNIP1Q9NZI2 227 aa11.95□□□□□ -0.5
COMMD4-205ENST00000562310 FLVCR2Q9UPI3 526 aa11.95□□□□□ -0.5
COMMD4-205ENST00000562310 PPIAL4AQ9Y536 164 aa11.95□□□□□ -0.5
COMMD4-205ENST00000562310 ZNF462Q96JM2 2506 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 SNRPGP15A8MWD9 76 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 NPIPB11E5RHQ5 1161 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 SDCBPO00560 298 aaPredicted RBP11.94□□□□□ -0.5
COMMD4-205ENST00000562310 CD8AP01732 235 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 HPXP02790 462 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 TK1P04183 234 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 GSTT2P0CG29 244 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 UBE2MP61081 183 aaKnown RBP11.94□□□□□ -0.5
COMMD4-205ENST00000562310 SEC61A1P61619 476 aaKnown RBP11.94□□□□□ -0.5
COMMD4-205ENST00000562310 IL13RA1P78552 427 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 HOXA4Q00056 320 aaPredicted RBP11.94□□□□□ -0.5
COMMD4-205ENST00000562310 TLE4Q04727 773 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 HMGN3Q15651 99 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 KRBOX4Q5JUW0 171 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 ZNF660Q6AZW8 331 aaPredicted RBP11.94□□□□□ -0.5
COMMD4-205ENST00000562310 FAHD2BQ6P2I3 314 aaPredicted RBP11.94□□□□□ -0.5
COMMD4-205ENST00000562310 DHRS11Q6UWP2 260 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 GLDNQ6ZMI3 551 aaPredicted RBP11.94□□□□□ -0.5
COMMD4-205ENST00000562310 ZNF788Q6ZQV5 615 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 CCL17Q92583 94 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 DACT3Q96B18 629 aaPredicted RBP11.94□□□□□ -0.5
COMMD4-205ENST00000562310 FAHD2AQ96GK7 314 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 COQ2Q96H96 371 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 GAFA1Q96PS6 74 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 ZNF2Q9BSG1 426 aaPredicted RBP11.94□□□□□ -0.5
COMMD4-205ENST00000562310 SHARPINQ9H0F6 387 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 GHITMQ9H3K2 345 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 UBTD1Q9HAC8 227 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 KIF25Q9UIL4 384 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 METRNQ9UJH8 293 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 PCDHB10Q9UN67 800 aa11.94□□□□□ -0.5
COMMD4-205ENST00000562310 UNC79Q9P2D8 2635 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 DSCAMO60469 2012 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 MEIKINA0A087WXM9 373 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 A0A0A6YYJ9 748 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 HMX3A6NHT5 357 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 SIGLEC5O15389 551 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 NDUFA2O43678 99 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 SOD3P08294 240 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 RNF224P0DH78 156 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 ANXA7P20073 488 aaKnown RBP11.93□□□□□ -0.5
COMMD4-205ENST00000562310 ERP29P30040 261 aaKnown RBP11.93□□□□□ -0.5
COMMD4-205ENST00000562310 P2RX3P56373 397 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 HERV-K104P61576 105 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 FAM201AQ5SY85 155 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 AADACL3Q5VUY0 350 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 C20orf204Q6ZNR8 217 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 SLC36A1Q7Z2H8 476 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 PEG10Q86TG7 708 aaKnown RBP11.93□□□□□ -0.5
COMMD4-205ENST00000562310 AKAP14Q86UN6 197 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 MRGPRFQ96AM1 343 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 OR51J1Q9H342 316 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 RAB9BQ9NP90 201 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 OPN4Q9UHM6 478 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 VSIG4Q9Y279 399 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 ABCA4P78363 2273 aa11.93□□□□□ -0.5
COMMD4-205ENST00000562310 A0A1W2PPR1 153 aa11.92□□□□□ -0.5
COMMD4-205ENST00000562310 ODAMA1E959 279 aa11.92□□□□□ -0.5
COMMD4-205ENST00000562310 CREBL2O60519 120 aaPredicted RBP11.92□□□□□ -0.5
COMMD4-205ENST00000562310 GYPAP02724 150 aa11.92□□□□□ -0.5
COMMD4-205ENST00000562310 SCTP09683 121 aa11.92□□□□□ -0.5
COMMD4-205ENST00000562310 PGAM2P15259 253 aa11.92□□□□□ -0.5
COMMD4-205ENST00000562310 RCC1P18754 421 aaPredicted RBP11.92□□□□□ -0.5
COMMD4-205ENST00000562310 FCGR2CP31995 323 aa11.92□□□□□ -0.5
COMMD4-205ENST00000562310 NPY4RP50391 375 aa11.92□□□□□ -0.5
COMMD4-205ENST00000562310 RRAS2P62070 204 aaPredicted RBP11.92□□□□□ -0.5
COMMD4-205ENST00000562310 AESQ08117 197 aa11.92□□□□□ -0.5
COMMD4-205ENST00000562310 TMED4Q7Z7H5 227 aa11.92□□□□□ -0.5
COMMD4-205ENST00000562310 SLC25A42Q86VD7 318 aa11.92□□□□□ -0.5
COMMD4-205ENST00000562310 TGIF2LYQ8IUE0 185 aa11.92□□□□□ -0.5
COMMD4-205ENST00000562310 DEFB108BQ8NET1 73 aa11.92□□□□□ -0.5
COMMD4-205ENST00000562310 TMEM185AQ8NFB2 350 aa11.92□□□□□ -0.5
COMMD4-205ENST00000562310 ZFAND1Q8TCF1 268 aa11.92□□□□□ -0.5
COMMD4-205ENST00000562310 MARCH1Q8TCQ1 289 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms