RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 NANPQ8TBE9 248 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 ZNF418Q8TF45 676 aaPredicted RBP5.73□□□□□ -1.49
SPG11-224ENST00000561268 SCGB3A2Q96PL1 93 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 SLC6A7Q99884 636 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 GINS4Q9BRT9 223 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 SSBP3Q9BWW4 388 aaPredicted RBP5.73□□□□□ -1.49
SPG11-224ENST00000561268 SUCNR1Q9BXA5 334 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 TLNRD1Q9H1K6 362 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 PRDM13Q9H4Q3 707 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 ZMAT3Q9HA38 289 aaKnown RBP5.73□□□□□ -1.49
SPG11-224ENST00000561268 SRA1Q9HD15 236 aaKnown RBP5.73□□□□□ -1.49
SPG11-224ENST00000561268 RDH8Q9NYR8 311 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 MRPL15Q9P015 296 aaKnown RBP5.73□□□□□ -1.49
SPG11-224ENST00000561268 CTSZQ9UBR2 303 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 KLK11Q9UBX7 282 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 RAB22AQ9UL26 194 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 ANAPC10Q9UM13 185 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 PCDHB10Q9UN67 800 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 DHDHQ9UQ10 334 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 R4GMQ9 66 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 TRBV6-7A0A0A0MS04 114 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 RAB19A4D1S5 217 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 DISC1C4P0D8 188 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 F5H5K5 113 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 CLDN34H7C241 214 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 FCN3O75636 299 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 CYB5AP00167 134 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 CYB5R3P00387 301 aaPredicted RBP5.72□□□□□ -1.49
SPG11-224ENST00000561268 LHBP01229 141 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 ALDOBP05062 364 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 CTRB1P17538 263 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 HTR2CP28335 458 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 CFHR2P36980 270 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 NUP62P37198 522 aaPredicted RBP5.72□□□□□ -1.49
SPG11-224ENST00000561268 ECI1P42126 302 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 CBX5P45973 191 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 POU3F4P49335 361 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 GRB2P62993 217 aaKnown RBP5.72□□□□□ -1.49
SPG11-224ENST00000561268 C2orf76Q3KRA6 126 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 HES5Q5TA89 166 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 SFRP4Q6FHJ7 346 aaPredicted RBP5.72□□□□□ -1.49
SPG11-224ENST00000561268 CTRB2Q6GPI1 263 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 ZNF529Q6P280 563 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 MOB3CQ70IA8 216 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 TMUB2Q71RG4 321 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 PGAP1Q75T13 922 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 MRPL21Q7Z2W9 205 aaKnown RBP5.72□□□□□ -1.49
SPG11-224ENST00000561268 OR2W3Q7Z3T1 314 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 WDR86Q86TI4 376 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 SLC25A42Q86VD7 318 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 MOGAT3Q86VF5 341 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 KCNRGQ8N5I3 272 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 BHLHE23Q8NDY6 225 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 OR56B2PQ8NGI1 322 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 OR4C16Q8NGL9 310 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 OR2AE1Q8NHA4 323 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 TNFAIP8L1Q8WVP5 186 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 AQP3Q92482 292 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 SPTSSAQ969W0 71 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 C10orf35Q96D05 121 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 SLAMF6Q96DU3 332 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 SEH1LQ96EE3 360 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 NEIL1Q96FI4 390 aaPredicted RBP5.72□□□□□ -1.49
SPG11-224ENST00000561268 ZNF48Q96MX3 618 aaPredicted RBP5.72□□□□□ -1.49
SPG11-224ENST00000561268 JMJD8Q96S16 334 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 AIFM2Q9BRQ8 373 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 ADAT1Q9BUB4 502 aaKnown RBP5.72□□□□□ -1.49
SPG11-224ENST00000561268 DPCDQ9BVM2 203 aaPredicted RBP5.72□□□□□ -1.49
SPG11-224ENST00000561268 C7orf69Q9H7B7 122 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.72□□□□□ -1.49
SPG11-224ENST00000561268 TMEM100Q9NV29 134 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 SDHAF2Q9NX18 166 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 GHRLQ9UBU3 117 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 ZNF69Q9UC07 566 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 MIOXQ9UGB7 285 aa5.72□□□□□ -1.49
SPG11-224ENST00000561268 WNK1Q9H4A3 2382 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 TRAV8-7A0A075B6U6 113 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 TMEM82A0PJX8 343 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 TVP23AA6NH52 213 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 LRRC30A6NM36 301 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 MPTX1A8MV57 137 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 PRR32B1ATL7 298 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 ZNF736B4DX44 427 aaPredicted RBP5.71□□□□□ -1.5
SPG11-224ENST00000561268 C22orf46C9J442 243 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 SMLR1H3BR10 107 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.71□□□□□ -1.5
SPG11-224ENST00000561268 TRIM77I1YAP6 450 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 DUS4LO95620 317 aaKnown RBP5.71□□□□□ -1.5
SPG11-224ENST00000561268 IGLV3-1P01715 115 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 HLA-DQA2P01906 255 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 LCATP04180 440 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 GSTP1P09211 210 aaKnown RBP5.71□□□□□ -1.5
SPG11-224ENST00000561268 GTF2F2P13984 249 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 MMP9P14780 707 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 RPS2P15880 293 aaKnown RBP5.71□□□□□ -1.5
SPG11-224ENST00000561268 ZNF823P16415 610 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 CXCL2P19875 107 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 CD80P33681 288 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 KIR3DL2P43630 455 aa5.71□□□□□ -1.5
SPG11-224ENST00000561268 CX3CR1P49238 355 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms