RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CLEC7AQ9BXN2 247 aa8.83□□□□□ -1
TPM1-229ENST00000561242 PPIL3Q9H2H8 161 aaKnown RBP8.83□□□□□ -1
TPM1-229ENST00000561242 RBM7Q9Y580 266 aaKnown RBP8.83□□□□□ -1
TPM1-229ENST00000561242 DYSFO75923 2080 aa8.83□□□□□ -1
TPM1-229ENST00000561242 ABCA12Q86UK0 2595 aa8.83□□□□□ -1
TPM1-229ENST00000561242 MAST4O15021 2626 aa8.82□□□□□ -1
TPM1-229ENST00000561242 TRAV24A0A0B4J272 114 aa8.82□□□□□ -1
TPM1-229ENST00000561242 TMEM272A0A1B0GTI8 110 aa8.82□□□□□ -1
TPM1-229ENST00000561242 KBTBD11-OT1A0A1B0GTJ5 212 aa8.82□□□□□ -1
TPM1-229ENST00000561242 A0A1W2PP11 408 aa8.82□□□□□ -1
TPM1-229ENST00000561242 SERPINE3A8MV23 424 aa8.82□□□□□ -1
TPM1-229ENST00000561242 TMEM14DPA8MWL7 114 aa8.82□□□□□ -1
TPM1-229ENST00000561242 SDCBPO00560 298 aaPredicted RBP8.82□□□□□ -1
TPM1-229ENST00000561242 NPFFO15130 113 aa8.82□□□□□ -1
TPM1-229ENST00000561242 RGS5O15539 181 aa8.82□□□□□ -1
TPM1-229ENST00000561242 ORC5O43913 435 aa8.82□□□□□ -1
TPM1-229ENST00000561242 IGHV1-8P0DP01 117 aa8.82□□□□□ -1
TPM1-229ENST00000561242 SLC2A2P11168 524 aaPredicted RBP8.82□□□□□ -1
TPM1-229ENST00000561242 CCL3L1P16619 93 aa8.82□□□□□ -1
TPM1-229ENST00000561242 TMBIM6P55061 237 aa8.82□□□□□ -1
TPM1-229ENST00000561242 MIDNQ504T8 468 aa8.82□□□□□ -1
TPM1-229ENST00000561242 ZNF782Q6ZMW2 699 aaPredicted RBP8.82□□□□□ -1
TPM1-229ENST00000561242 ABHD12Q8N2K0 398 aa8.82□□□□□ -1
TPM1-229ENST00000561242 OR10R2Q8NGX6 335 aa8.82□□□□□ -1
TPM1-229ENST00000561242 OR4K15Q8NH41 348 aa8.82□□□□□ -1
TPM1-229ENST00000561242 C15orf40Q8WUR7 153 aa8.82□□□□□ -1
TPM1-229ENST00000561242 C22orf15Q8WYQ4 148 aa8.82□□□□□ -1
TPM1-229ENST00000561242 CORO2AQ92828 525 aa8.82□□□□□ -1
TPM1-229ENST00000561242 GCDHQ92947 438 aaPredicted RBP8.82□□□□□ -1
TPM1-229ENST00000561242 SLC25A28Q96A46 364 aa8.82□□□□□ -1
TPM1-229ENST00000561242 FAAP24Q9BTP7 215 aa8.82□□□□□ -1
TPM1-229ENST00000561242 TM2D1Q9BX74 207 aa8.82□□□□□ -1
TPM1-229ENST00000561242 DCSTAMPQ9H295 470 aa8.82□□□□□ -1
TPM1-229ENST00000561242 CALYQ9NYX4 217 aa8.82□□□□□ -1
TPM1-229ENST00000561242 IDI2-AS1Q9NZ38 188 aa8.82□□□□□ -1
TPM1-229ENST00000561242 NDUFA13Q9P0J0 144 aa8.82□□□□□ -1
TPM1-229ENST00000561242 COMMD3Q9UBI1 195 aa8.82□□□□□ -1
TPM1-229ENST00000561242 HSF4Q9ULV5 492 aa8.82□□□□□ -1
TPM1-229ENST00000561242 A0A0A6YYH2 397 aa8.81□□□□□ -1
TPM1-229ENST00000561242 MEX3AA1L020 520 aaKnown RBP8.81□□□□□ -1
TPM1-229ENST00000561242 A6NJ64 397 aa8.81□□□□□ -1
TPM1-229ENST00000561242 TRIM64CA6NLI5 447 aa8.81□□□□□ -1
TPM1-229ENST00000561242 POM121CA8CG34 1229 aa8.81□□□□□ -1
TPM1-229ENST00000561242 MT-ND4P03905 459 aa8.81□□□□□ -1
TPM1-229ENST00000561242 SNRPBP14678 240 aaKnown RBP8.81□□□□□ -1
TPM1-229ENST00000561242 ZNF182P17025 639 aaPredicted RBP8.81□□□□□ -1
TPM1-229ENST00000561242 HTR1DP28221 377 aa8.81□□□□□ -1
TPM1-229ENST00000561242 BRS3P32247 399 aa8.81□□□□□ -1
TPM1-229ENST00000561242 KIR2DS4P43632 304 aa8.81□□□□□ -1
TPM1-229ENST00000561242 ZNF273Q14593 569 aa8.81□□□□□ -1
TPM1-229ENST00000561242 KIR2DS1Q14954 304 aa8.81□□□□□ -1
TPM1-229ENST00000561242 CCDC144NLQ6NUI1 221 aa8.81□□□□□ -1
TPM1-229ENST00000561242 METAP1DQ6UB28 335 aaPredicted RBP8.81□□□□□ -1
TPM1-229ENST00000561242 SLC16A12Q6ZSM3 486 aa8.81□□□□□ -1
TPM1-229ENST00000561242 C6orf201Q7Z4U5 140 aa8.81□□□□□ -1
TPM1-229ENST00000561242 FGFRL1Q8N441 504 aa8.81□□□□□ -1
TPM1-229ENST00000561242 RFESDQ8TAC1 157 aa8.81□□□□□ -1
TPM1-229ENST00000561242 IL1F10Q8WWZ1 152 aa8.81□□□□□ -1
TPM1-229ENST00000561242 SIRPDQ9H106 197 aa8.81□□□□□ -1
TPM1-229ENST00000561242 TMEM133Q9H2Q1 129 aa8.81□□□□□ -1
TPM1-229ENST00000561242 ZMAT3Q9HA38 289 aaKnown RBP8.81□□□□□ -1
TPM1-229ENST00000561242 C12orf4Q9NQ89 552 aa8.81□□□□□ -1
TPM1-229ENST00000561242 OR2S2Q9NQN1 319 aa8.81□□□□□ -1
TPM1-229ENST00000561242 FBLN5Q9UBX5 448 aa8.81□□□□□ -1
TPM1-229ENST00000561242 SPATA2Q9UM82 520 aa8.81□□□□□ -1
TPM1-229ENST00000561242 CELSR2Q9HCU4 2923 aa8.81□□□□□ -1
TPM1-229ENST00000561242 CENPVL3A0A0U1RRI6 287 aa8.8□□□□□ -1
TPM1-229ENST00000561242 C17orf98A8MV24 154 aa8.8□□□□□ -1
TPM1-229ENST00000561242 LEUTXA8MZ59 168 aa8.8□□□□□ -1
TPM1-229ENST00000561242 S100A5P33763 92 aa8.8□□□□□ -1
TPM1-229ENST00000561242 RPS19P39019 145 aaKnown RBP8.8□□□□□ -1
TPM1-229ENST00000561242 NCS1P62166 190 aa8.8□□□□□ -1
TPM1-229ENST00000561242 KRTAP1-1Q07627 177 aa8.8□□□□□ -1
TPM1-229ENST00000561242 CDNFQ49AH0 187 aa8.8□□□□□ -1
TPM1-229ENST00000561242 ARSJQ5FYB0 599 aaPredicted RBP8.8□□□□□ -1
TPM1-229ENST00000561242 UBE2NLQ5JXB2 153 aa8.8□□□□□ -1
TPM1-229ENST00000561242 PRAMEF5Q5TYX0 476 aa8.8□□□□□ -1
TPM1-229ENST00000561242 HEPN1Q6WQI6 88 aa8.8□□□□□ -1
TPM1-229ENST00000561242 BRD3OSQ6XYD6 125 aa8.8□□□□□ -1
TPM1-229ENST00000561242 ZNF497Q6ZNH5 498 aa8.8□□□□□ -1
TPM1-229ENST00000561242 ZNF554Q86TJ5 538 aa8.8□□□□□ -1
TPM1-229ENST00000561242 SAMD12Q8N8I0 201 aa8.8□□□□□ -1
TPM1-229ENST00000561242 OR9G1Q8NH87 305 aa8.8□□□□□ -1
TPM1-229ENST00000561242 LGALS14Q8TCE9 139 aa8.8□□□□□ -1
TPM1-229ENST00000561242 TMEM158Q8WZ71 300 aa8.8□□□□□ -1
TPM1-229ENST00000561242 SLC25A46Q96AG3 418 aa8.8□□□□□ -1
TPM1-229ENST00000561242 RPEQ96AT9 228 aa8.8□□□□□ -1
TPM1-229ENST00000561242 GINS4Q9BRT9 223 aa8.8□□□□□ -1
TPM1-229ENST00000561242 PECRQ9BY49 303 aa8.8□□□□□ -1
TPM1-229ENST00000561242 LPAR5Q9H1C0 372 aa8.8□□□□□ -1
TPM1-229ENST00000561242 ZNF286AQ9HBT8 521 aa8.8□□□□□ -1
TPM1-229ENST00000561242 RAB18Q9NP72 206 aa8.8□□□□□ -1
TPM1-229ENST00000561242 IFT46Q9NQC8 304 aa8.8□□□□□ -1
TPM1-229ENST00000561242 RHBDL2Q9NX52 303 aa8.8□□□□□ -1
TPM1-229ENST00000561242 MRPS7Q9Y2R9 242 aaKnown RBP8.8□□□□□ -1
TPM1-229ENST00000561242 TBL2Q9Y4P3 447 aaKnown RBP8.8□□□□□ -1
TPM1-229ENST00000561242 CCDC168Q8NDH2 2452 aa8.8□□□□□ -1
TPM1-229ENST00000561242 TRAV18A0A075B6X5 111 aa8.79□□□□□ -1
TPM1-229ENST00000561242 SOCS1O15524 211 aa8.79□□□□□ -1
TPM1-229ENST00000561242 GSTP1P09211 210 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms