RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 A0A1W2PPE3 182 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 ZNF729A6NN14 1252 aaPredicted RBP10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 FAM90A22PA8MWA6 464 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 F2RL2O00254 374 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 MAGEB3O15480 346 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 OR7C1O76099 320 aaPredicted RBP10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 IL1AP01583 271 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 MAS1P04201 325 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 VSIG10L2P0DP72 767 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 NFYBP25208 207 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 HTR1DP28221 377 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 KIR2DS4P43632 304 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 GNG10P50151 68 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 DYNLT3P51808 116 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 BDH1Q02338 343 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 TPTE2P1Q5T6R2 138 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 SIGIRRQ6IA17 410 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 CFHR4Q92496 578 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 METTL9Q9H1A3 318 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 RANBP3Q9H6Z4 567 aaPredicted RBP10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 IFT22Q9H7X7 185 aa10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 MRPS28Q9Y2Q9 187 aaKnown RBP10.14□□□□□ -0.79
CHRNA3-208ENST00000561128 TET2Q6N021 2002 aaPredicted RBP10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 ADARB2-AS1A8MUL3 147 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 NPIPB11E5RHQ5 1161 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 PTGES3LE9PB15 166 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 C15orf65H3BRN8 121 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 BUB1B-PAK6H3BSN5 160 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 AMY1AP04745 511 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 AMY2AP04746 511 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 TAS2R43P59537 309 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 SLC35A2P78381 396 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 PAX5Q02548 391 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 RBM39Q14498 530 aaKnown RBP10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 GLIPR1L1Q6UWM5 242 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 LRRTM1Q86UE6 522 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 JAGN1Q8N5M9 183 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 GFI1Q99684 422 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 TMED9Q9BVK6 235 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 NPFFR1Q9GZQ6 430 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 LINC00574Q9H8X3 128 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 CHCHD3Q9NX63 227 aaKnown RBP10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 IDI2-AS1Q9NZ38 188 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 OR6C3Q9NZP0 311 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 RCC2Q9P258 522 aaKnown RBP10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 DPM3Q9P2X0 92 aa10.13□□□□□ -0.79
CHRNA3-208ENST00000561128 A0A1W2PPI3 338 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 SLC31A2O15432 143 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 SC5DO75845 299 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 CD28P10747 220 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 MYF6P23409 242 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 GABPB1Q06547 395 aaPredicted RBP10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 HERPUD1Q15011 391 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 OR10K2Q6IF99 312 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 C10orf99Q6UWK7 81 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 UNQ9370/PRO34162Q6UXP9 181 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 Q6ZPA2 131 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 LIAT1Q6ZQX7 453 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 C1QL4Q86Z23 238 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 OR2T6Q8NHC8 308 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 CCDC107Q8WV48 283 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 FAM46BQ96A09 425 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 CPNE2Q96FN4 548 aaPredicted RBP10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 ABCB10Q9NRK6 738 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 PSG11Q9UQ72 335 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 WNK1Q9H4A3 2382 aa10.12□□□□□ -0.79
CHRNA3-208ENST00000561128 IGHV3-43A0A0B4J1X8 118 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 FUOMA2VDF0 154 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 M0QZ24 198 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 CD1AP06126 327 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 IGHV3-43DP0DP04 118 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 MAP2K4P45985 399 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 RPS25P62851 125 aaKnown RBP10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 MED21Q13503 144 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 MPV17LQ2QL34 196 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 ACSM3Q53FZ2 586 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 ATAD3CQ5T2N8 411 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 AWAT2Q6E213 333 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 IZUMO2Q6UXV1 221 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 ZNF497Q6ZNH5 498 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 FAM110DQ8TAY7 271 aaPredicted RBP10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 Q96M66 194 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 MND1Q9BWT6 205 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 ANKRD60Q9BZ19 345 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 WNT10AQ9GZT5 417 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 MMP28Q9H239 520 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 VCXQ9H320 206 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 CMYA5Q8N3K9 4069 aa10.11□□□□□ -0.79
CHRNA3-208ENST00000561128 TMEM30CPA0ZSE6 113 aa10.1□□□□□ -0.79
CHRNA3-208ENST00000561128 J3QR06 171 aa10.1□□□□□ -0.79
CHRNA3-208ENST00000561128 TIMM23O14925 209 aa10.1□□□□□ -0.79
CHRNA3-208ENST00000561128 MT-ND4P03905 459 aa10.1□□□□□ -0.79
CHRNA3-208ENST00000561128 CSTBP04080 98 aaKnown RBP10.1□□□□□ -0.79
CHRNA3-208ENST00000561128 GTF2F2P13984 249 aa10.1□□□□□ -0.79
CHRNA3-208ENST00000561128 MGMTP16455 207 aa10.1□□□□□ -0.79
CHRNA3-208ENST00000561128 GNMTQ14749 295 aa10.1□□□□□ -0.79
CHRNA3-208ENST00000561128 SPHARQ15513 63 aa10.1□□□□□ -0.79
CHRNA3-208ENST00000561128 TCTEX1D4Q5JR98 221 aa10.1□□□□□ -0.79
CHRNA3-208ENST00000561128 LIPKQ5VXJ0 399 aa10.1□□□□□ -0.79
CHRNA3-208ENST00000561128 RNLSQ5VYX0 342 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms