RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PITPNC1Q9UKF7 332 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 TCF19Q9Y242 345 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 IGHV2-26A0A0B4J1V2 119 aa12.87□□□□□ -0.35
LMX1B-204ENST00000561065 A0A1W2PPK0 400 aa12.87□□□□□ -0.35
LMX1B-204ENST00000561065 TOR1AO14656 332 aa12.87□□□□□ -0.35
LMX1B-204ENST00000561065 MRPS14O60783 128 aaKnown RBP12.87□□□□□ -0.35
LMX1B-204ENST00000561065 ARL6IP5O75915 188 aa12.87□□□□□ -0.35
LMX1B-204ENST00000561065 CDRT1O95170 752 aa12.87□□□□□ -0.35
LMX1B-204ENST00000561065 HSMCR30P0CW71 290 aa12.87□□□□□ -0.35
LMX1B-204ENST00000561065 CRHBPP24387 322 aa12.87□□□□□ -0.35
LMX1B-204ENST00000561065 GDNFP39905 211 aa12.87□□□□□ -0.35
LMX1B-204ENST00000561065 CEACAM3P40198 252 aa12.87□□□□□ -0.35
LMX1B-204ENST00000561065 KIR2DS4P43632 304 aa12.87□□□□□ -0.35
LMX1B-204ENST00000561065 OR3A4PP47883 348 aa12.87□□□□□ -0.35
LMX1B-204ENST00000561065 HABP2Q14520 560 aaPredicted RBP12.87□□□□□ -0.35
LMX1B-204ENST00000561065 SSX2Q16385 188 aa12.87□□□□□ -0.35
LMX1B-204ENST00000561065 TMEM219Q86XT9 240 aa12.87□□□□□ -0.35
LMX1B-204ENST00000561065 OR4C13Q8NGP0 309 aa12.87□□□□□ -0.35
LMX1B-204ENST00000561065 OR13C5Q8NGS8 318 aa12.87□□□□□ -0.35
LMX1B-204ENST00000561065 NKX3-1Q99801 234 aaPredicted RBP12.87□□□□□ -0.35
LMX1B-204ENST00000561065 CST11Q9H112 138 aa12.87□□□□□ -0.35
LMX1B-204ENST00000561065 MRPS28Q9Y2Q9 187 aaKnown RBP12.87□□□□□ -0.35
LMX1B-204ENST00000561065 MEIKINA0A087WXM9 373 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 A6NDX4 124 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 FAM90A10PA6NDY2 464 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 FAM90A18PA6NE21 464 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 FAM90A16PA6NEW6 464 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 FAM90A20PA6NIJ5 464 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 FAM90A7PA6NKC0 464 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 FAM90A22PA8MWA6 464 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 FAM90A12PA8MX19 464 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 FAM90A5PA8MXJ8 464 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 FAM90A23PA8MXZ1 464 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 FAM90A15PP0C7V4 464 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 FAM90A13PP0C7W8 464 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 FAM90A14PP0C7W9 464 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 FAM90A24PP0C7X0 464 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 SERPINA2P20848 420 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 GLIPR1P48060 266 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 PSMD7P51665 324 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 RBM11P57052 281 aaKnown RBP12.86□□□□□ -0.35
LMX1B-204ENST00000561065 PAX5Q02548 391 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 FAM189A2Q15884 450 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 HSD17B12Q53GQ0 312 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 PRAMEF5Q5TYX0 476 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 AWAT2Q6E213 333 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 GLIPR1L1Q6UWM5 242 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 KLHDC1Q8N7A1 406 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 OR4P4Q8NGL7 312 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 OR10K1Q8NGX5 313 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 NEK7Q8TDX7 302 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 COQ2Q96H96 371 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 TMED9Q9BVK6 235 aa12.86□□□□□ -0.35
LMX1B-204ENST00000561065 YTHDF1Q9BYJ9 559 aaKnown RBP12.86□□□□□ -0.35
LMX1B-204ENST00000561065 KBTBD11-OT1A0A1B0GTJ5 212 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 FAM172BPA6NC97 362 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 MCRIP1C9JLW8 97 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 GLAP06280 429 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 SRMP19623 302 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 CDK2P24941 298 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 HTR1DP28221 377 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 MLLT11Q13015 90 aaPredicted RBP12.85□□□□□ -0.35
LMX1B-204ENST00000561065 TPBGQ13641 420 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 IRF3Q14653 427 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 FBLN7Q53RD9 439 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 UTF1Q5T230 341 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 ATAD3CQ5T2N8 411 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 UNQ9370/PRO34162Q6UXP9 181 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 SLC16A12Q6ZSM3 486 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 CEACAM19Q7Z692 300 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 ABHD12Q8N2K0 398 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 SVOPQ8N4V2 548 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 C11orf44Q8N8P7 122 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 OR10A7Q8NGE5 316 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 NDNFQ8TB73 568 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 DPCDQ9BVM2 203 aaPredicted RBP12.85□□□□□ -0.35
LMX1B-204ENST00000561065 NPFFR1Q9GZQ6 430 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 SERTAD4Q9NUC0 356 aa12.85□□□□□ -0.35
LMX1B-204ENST00000561065 TGP01266 2768 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 TRAV8-7A0A075B6U6 113 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 TRAV24A0A0B4J272 114 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 LEUTXA8MZ59 168 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 CA11O75493 328 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 BRS3P32247 399 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 ATXN7L3Q14CW9 347 aaPredicted RBP12.84□□□□□ -0.35
LMX1B-204ENST00000561065 HERPUD1Q15011 391 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 C2orf68Q2NKX9 166 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 PIGYQ3MUY2 71 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 PDLIM3Q53GG5 364 aaPredicted RBP12.84□□□□□ -0.35
LMX1B-204ENST00000561065 LIPKQ5VXJ0 399 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 C11orf88Q6PI97 169 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 Q6ZS46 218 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 Q8N2B8 174 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 SUMF2Q8NBJ7 301 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 OR2T6Q8NHC8 308 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 FAM110DQ8TAY7 271 aaPredicted RBP12.84□□□□□ -0.35
LMX1B-204ENST00000561065 CFHR4Q92496 578 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 MUL1Q969V5 352 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 OR5M11Q96RB7 305 aa12.84□□□□□ -0.35
LMX1B-204ENST00000561065 MGLLQ99685 303 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms