RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 RHOFQ9HBH0 211 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 CKLFQ9UBR5 152 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 STUB1Q9UNE7 303 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 VGLL3A8MV65 326 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 SLC33A1O00400 549 aaPredicted RBP8.69□□□□□ -1.02
TPM1-227ENST00000560970 HSPB6O14558 160 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 HTR3BO95264 441 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 UCHL1P09936 223 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 ZNF44P15621 663 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 ZNF182P17025 639 aaPredicted RBP8.69□□□□□ -1.02
TPM1-227ENST00000560970 SERPINA2P20848 420 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 PSMA1P25786 263 aaKnown RBP8.69□□□□□ -1.02
TPM1-227ENST00000560970 KIR2DS4P43632 304 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 EDDM3BP56851 147 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 VBP1P61758 197 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 NCS1P62166 190 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 FABP5Q01469 135 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 GPR50Q13585 617 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 GRK1Q15835 563 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 FAM189A2Q15884 450 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 LY6EQ16553 131 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 Q6ZPA2 131 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 JAGN1Q8N5M9 183 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 MS4A15Q8N5U1 240 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 Q8NFD4 153 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 OR4D6Q8NGJ1 314 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 OR51T1Q8NGJ9 327 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 PPP1R35Q8TAP8 253 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 NDNFQ8TB73 568 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 DYNC2LI1Q8TCX1 351 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 COQ2Q96H96 371 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 CYYR1Q96J86 154 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 GFI1Q99684 422 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 IL36GQ9NZH8 169 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 CCDC59Q9P031 241 aaKnown RBP8.69□□□□□ -1.02
TPM1-227ENST00000560970 ING4Q9UNL4 249 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 SIGLEC9Q9Y336 463 aa8.69□□□□□ -1.02
TPM1-227ENST00000560970 KIAA2026Q5HYC2 2103 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 TRAV24A0A0B4J272 114 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 SH2D1BO14796 132 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 CHST1O43916 411 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 FBXO24O75426 580 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 GALP22466 123 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 LMO1P25800 156 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 RBM11P57052 281 aaKnown RBP8.68□□□□□ -1.02
TPM1-227ENST00000560970 SCN1BQ07699 218 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 IL13RA2Q14627 380 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 ATXN7L3Q14CW9 347 aaPredicted RBP8.68□□□□□ -1.02
TPM1-227ENST00000560970 RSU1Q15404 277 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 SLC22A6Q4U2R8 563 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 HSD17B12Q53GQ0 312 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 GDPD3Q7L5L3 318 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 CEACAM19Q7Z692 300 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 C11orf44Q8N8P7 122 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 DTX3Q8N9I9 347 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 C17orf50Q8WW18 174 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 THRSPQ92748 146 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 CHCHD6Q9BRQ6 235 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 METTL9Q9H1A3 318 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 OR51E2Q9H255 320 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 DCSTAMPQ9H295 470 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 KCNK15Q9H427 330 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 GLS2Q9UI32 602 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 SSR3Q9UNL2 185 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 MRPS28Q9Y2Q9 187 aaKnown RBP8.68□□□□□ -1.02
TPM1-227ENST00000560970 A3GALT2U3KPV4 340 aa8.68□□□□□ -1.02
TPM1-227ENST00000560970 COL7A1Q02388 2944 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 LOC100506127A0A0U1RQW1 187 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 A0A1W2PPH5 198 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 SHISA3A0PJX4 238 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 MGST3O14880 152 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 PRB2P02812 416 aaPredicted RBP8.67□□□□□ -1.02
TPM1-227ENST00000560970 VSIG10L2P0DP72 767 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 GLIPR1P48060 266 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 BMXP51813 675 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 P2RX3P56373 397 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 LSM3P62310 102 aaKnown RBP8.67□□□□□ -1.02
TPM1-227ENST00000560970 NHLRC3Q5JS37 347 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 HIST2H2BDQ6DRA6 164 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 AWAT2Q6E213 333 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 CD200R1LQ6Q8B3 271 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 GLIPR1L1Q6UWM5 242 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 ZNF782Q6ZMW2 699 aaPredicted RBP8.67□□□□□ -1.02
TPM1-227ENST00000560970 OSR2Q8N2R0 312 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 NKAIN3Q8N8D7 197 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 PLPPR1Q8TBJ4 325 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 MRAPQ8TCY5 172 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 PHYHIPQ92561 330 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 MEGF9Q9H1U4 602 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 ING3Q9NXR8 418 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 ST3GAL6Q9Y274 331 aa8.67□□□□□ -1.02
TPM1-227ENST00000560970 C17orf98A8MV24 154 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 GEMIN2O14893 280 aaKnown RBP8.66□□□□□ -1.02
TPM1-227ENST00000560970 DEGS1O15121 323 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 MMP23AO75900 390 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 CSN2P05814 226 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 ZNF728P0DKX0 622 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 SRMP19623 302 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 ERP29P30040 261 aaKnown RBP8.66□□□□□ -1.02
TPM1-227ENST00000560970 FGF9P31371 208 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms