RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 OR2W3Q7Z3T1 314 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 PIP4P2Q8N4L2 257 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 ZSCAN4Q8NAM6 433 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-214ENST00000560402 DUSP18Q8NEJ0 188 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 OR14K1Q8NGZ2 314 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 OR5R1Q8NH85 324 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 TRIM63Q969Q1 353 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 FAM46BQ96A09 425 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 ADAT3Q96EY9 351 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-214ENST00000560402 MED30Q96HR3 178 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 S100A13Q99584 98 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 SIRT7Q9NRC8 400 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 ETAA1Q9NY74 926 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 GHRLQ9UBU3 117 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 DUX4Q9UBX2 424 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 V9GYS6 101 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 TMEM272A0A1B0GTI8 110 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 A6NIN4 97 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 RNASEK-C17orf49H0YIS7 233 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 M0R1W7 72 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 SULT1C2O00338 296 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 NPFFO15130 113 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 SIGLEC5O15389 551 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 PLA2G10O15496 165 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 IGLV3-1P01715 115 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 SPNP16150 400 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 PRKACBP22694 351 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 RFX2P48378 723 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 ACTBP60709 375 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 DGCR2P98153 550 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 RIPPLY1Q0D2K3 151 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 PRDX4Q13162 271 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 IKZF1Q13422 519 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 AWAT2Q6E213 333 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 ASPHD2Q6ICH7 369 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 ZNF529Q6P280 563 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 ZNF788Q6ZQV5 615 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 C1orf122Q6ZSJ8 110 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 Q6ZSV7 163 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 AKAP14Q86UN6 197 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 ZDHHC23Q8IYP9 409 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 IZUMO1Q8IYV9 350 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 OR5P3Q8WZ94 311 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 CREB3L1Q96BA8 519 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 SPSB1Q96BD6 273 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 SCPEP1Q9HB40 452 aa11.12□□□□□ -0.63
SMAD3-214ENST00000560402 PRKDCP78527 4128 aaKnown RBP11.12□□□□□ -0.63
SMAD3-214ENST00000560402 TET2Q6N021 2002 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-214ENST00000560402 RBBP9O75884 186 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 TSPAN9O75954 239 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 DHFRP00374 187 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 CSF1P09603 554 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 CD3GP09693 182 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 TRAPPC2P0DI81 140 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 TRAPPC2BP0DI82 140 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 AMY2BP19961 511 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 PRSS3P35030 304 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 GDNFP39905 211 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 UBE2E1P51965 193 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 KRTAP10-3P60369 221 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 C2orf68Q2NKX9 166 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 RNASE12Q5GAN4 147 aaKnown RBP11.11□□□□□ -0.63
SMAD3-214ENST00000560402 FAM76BQ5HYJ3 339 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 ZBTB37Q5TC79 503 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 Q6ZSR3 168 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 PDZD9Q8IXQ8 264 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 CADM3Q8N126 398 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 FGFRL1Q8N441 504 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 Q8N7P7 452 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 DTX3Q8N9I9 347 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 OR51A2Q8NGJ7 313 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 KCNG3Q8TAE7 436 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 CHAC2Q8WUX2 184 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 H1FXQ92522 213 aaKnown RBP11.11□□□□□ -0.63
SMAD3-214ENST00000560402 GAFA1Q96PS6 74 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 URM1Q9BTM9 101 aaKnown RBP11.11□□□□□ -0.63
SMAD3-214ENST00000560402 CHST5Q9GZS9 411 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 CST11Q9H112 138 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 METTL8Q9H825 291 aaKnown RBP11.11□□□□□ -0.63
SMAD3-214ENST00000560402 ZNF319Q9P2F9 582 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 NLKQ9UBE8 527 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 SLC25A10Q9UBX3 287 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-214ENST00000560402 FBLN5Q9UBX5 448 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 PIGLQ9Y2B2 252 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 MRPS28Q9Y2Q9 187 aaKnown RBP11.11□□□□□ -0.63
SMAD3-214ENST00000560402 NUBP2Q9Y5Y2 271 aa11.11□□□□□ -0.63
SMAD3-214ENST00000560402 TRAV18A0A075B6X5 111 aa11.1□□□□□ -0.63
SMAD3-214ENST00000560402 TRBV23-1A0A0A0MS06 115 aa11.1□□□□□ -0.63
SMAD3-214ENST00000560402 ZNF816-ZNF321PA0A0X1KG74 233 aa11.1□□□□□ -0.63
SMAD3-214ENST00000560402 ZNF850A8MQ14 1090 aa11.1□□□□□ -0.63
SMAD3-214ENST00000560402 ACKR3P25106 362 aa11.1□□□□□ -0.63
SMAD3-214ENST00000560402 SAA4P35542 130 aa11.1□□□□□ -0.63
SMAD3-214ENST00000560402 GPR176Q14439 515 aa11.1□□□□□ -0.63
SMAD3-214ENST00000560402 ARL6IP1Q15041 203 aa11.1□□□□□ -0.63
SMAD3-214ENST00000560402 OR52N4Q8NGI2 321 aa11.1□□□□□ -0.63
SMAD3-214ENST00000560402 ANGPTL6Q8NI99 470 aa11.1□□□□□ -0.63
SMAD3-214ENST00000560402 HPSE2Q8WWQ2 592 aa11.1□□□□□ -0.63
SMAD3-214ENST00000560402 TNFRSF14Q92956 283 aa11.1□□□□□ -0.63
SMAD3-214ENST00000560402 SEH1LQ96EE3 360 aa11.1□□□□□ -0.63
SMAD3-214ENST00000560402 RNF170Q96K19 258 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms