RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 WDR86Q86TI4 376 aa15.07■□□□□ 0
SNX1-208ENST00000559844 SLC51BQ86UW2 128 aa15.07■□□□□ 0
SNX1-208ENST00000559844 KCNRGQ8N5I3 272 aa15.07■□□□□ 0
SNX1-208ENST00000559844 SYT3Q9BQG1 590 aa15.07■□□□□ 0
SNX1-208ENST00000559844 SLC25A15Q9Y619 301 aa15.07■□□□□ 0
SNX1-208ENST00000559844 ANKHD1Q8IWZ3 2542 aaKnown RBP15.07■□□□□ 0
SNX1-208ENST00000559844 COL12A1Q99715 3063 aa15.07■□□□□ 0
SNX1-208ENST00000559844 IGHV1-18A0A0C4DH31 117 aa15.07■□□□□ 0
SNX1-208ENST00000559844 LINC00862A6NCI5 91 aa15.07■□□□□ 0
SNX1-208ENST00000559844 RHBDL1O75783 438 aa15.07■□□□□ 0
SNX1-208ENST00000559844 DIRAS3O95661 229 aa15.07■□□□□ 0
SNX1-208ENST00000559844 ACAA1P09110 424 aaPredicted RBP15.07■□□□□ 0
SNX1-208ENST00000559844 KITLGP21583 273 aa15.07■□□□□ 0
SNX1-208ENST00000559844 MDH2P40926 338 aaKnown RBP15.07■□□□□ 0
SNX1-208ENST00000559844 PIGPP57054 158 aa15.07■□□□□ 0
SNX1-208ENST00000559844 FXYD4P59646 89 aa15.07■□□□□ 0
SNX1-208ENST00000559844 ALKBH6Q3KRA9 238 aa15.07■□□□□ 0
SNX1-208ENST00000559844 ZNF718Q3SXZ3 478 aa15.07■□□□□ 0
SNX1-208ENST00000559844 ALKBH2Q6NS38 261 aa15.07■□□□□ 0
SNX1-208ENST00000559844 ACOT7LQ6ZUV0 252 aa15.07■□□□□ 0
SNX1-208ENST00000559844 C22orf34Q6ZV56 151 aa15.07■□□□□ 0
SNX1-208ENST00000559844 CCDC71LQ8N9Z2 235 aa15.07■□□□□ 0
SNX1-208ENST00000559844 MUCL1Q96DR8 90 aa15.07■□□□□ 0
SNX1-208ENST00000559844 C2orf50Q96LR7 162 aa15.07■□□□□ 0
SNX1-208ENST00000559844 NAA60Q9H7X0 242 aa15.07■□□□□ 0
SNX1-208ENST00000559844 FASNP49327 2511 aaKnown RBP15.07■□□□□ 0
SNX1-208ENST00000559844 GCN1Q92616 2671 aaKnown RBP15.07■□□□□ 0
SNX1-208ENST00000559844 TRDCB7Z8K6 153 aa15.06■□□□□ 0
SNX1-208ENST00000559844 C19orf84I3L1E1 186 aa15.06■□□□□ 0
SNX1-208ENST00000559844 DEGS1O15121 323 aa15.06■□□□□ 0
SNX1-208ENST00000559844 ADAP1O75689 374 aa15.06■□□□□ 0
SNX1-208ENST00000559844 B3GALNT1O75752 331 aa15.06■□□□□ 0
SNX1-208ENST00000559844 DUSP1P28562 367 aa15.06■□□□□ 0
SNX1-208ENST00000559844 GCH1P30793 250 aa15.06■□□□□ 0
SNX1-208ENST00000559844 ERVK11-1P61568 191 aa15.06■□□□□ 0
SNX1-208ENST00000559844 GALNT14Q96FL9 552 aa15.06■□□□□ 0
SNX1-208ENST00000559844 USB1Q9BQ65 265 aaKnown RBP15.06■□□□□ 0
SNX1-208ENST00000559844 GSX2Q9BZM3 304 aa15.06■□□□□ 0
SNX1-208ENST00000559844 ATP23Q9Y6H3 246 aa15.06■□□□□ 0
SNX1-208ENST00000559844 HEATR1Q9H583 2144 aaKnown RBP15.06■□□□□ 0
SNX1-208ENST00000559844 IGHV2OR16-5A0A0B4J2B6 119 aa15.05■□□□□ 0
SNX1-208ENST00000559844 KANTRA0A1W2PQU2 76 aa15.05■□□□□ 0
SNX1-208ENST00000559844 ANKRD34BA5PLL1 514 aa15.05■□□□□ 0
SNX1-208ENST00000559844 H7C1Q1 480 aa15.05■□□□□ 0
SNX1-208ENST00000559844 PPYP01298 95 aa15.05■□□□□ 0
SNX1-208ENST00000559844 TK1P04183 234 aa15.05■□□□□ 0
SNX1-208ENST00000559844 PGA5P0DJD9 388 aa15.05■□□□□ 0
SNX1-208ENST00000559844 AADACP22760 399 aa15.05■□□□□ 0
SNX1-208ENST00000559844 AP2S1P53680 142 aaPredicted RBP15.05■□□□□ 0
SNX1-208ENST00000559844 ZNF154Q13106 437 aa15.05■□□□□ 0
SNX1-208ENST00000559844 C3orf36Q3SXR2 165 aa15.05■□□□□ 0
SNX1-208ENST00000559844 C1QTNF12Q5T7M4 302 aa15.05■□□□□ 0
SNX1-208ENST00000559844 MBNL2Q5VZF2 373 aaKnown RBP15.05■□□□□ 0
SNX1-208ENST00000559844 FIP1L1Q6UN15 594 aaKnown RBP15.05■□□□□ 0
SNX1-208ENST00000559844 SPERTQ8NA61 448 aa15.05■□□□□ 0
SNX1-208ENST00000559844 INO80EQ8NBZ0 244 aaPredicted RBP15.05■□□□□ 0
SNX1-208ENST00000559844 OR5T2Q8NGG2 359 aa15.05■□□□□ 0
SNX1-208ENST00000559844 LINC01560Q8TB33 94 aa15.05■□□□□ 0
SNX1-208ENST00000559844 WFIKKN1Q96NZ8 548 aa15.05■□□□□ 0
SNX1-208ENST00000559844 NRIP2Q9BQI9 281 aa15.05■□□□□ 0
SNX1-208ENST00000559844 RSRP1Q9BUV0 290 aa15.05■□□□□ 0
SNX1-208ENST00000559844 SUCNR1Q9BXA5 334 aa15.05■□□□□ 0
SNX1-208ENST00000559844 CXXC4Q9H2H0 198 aa15.05■□□□□ 0
SNX1-208ENST00000559844 PRR13Q9NZ81 148 aa15.05■□□□□ 0
SNX1-208ENST00000559844 MBD2Q9UBB5 411 aa15.05■□□□□ 0
SNX1-208ENST00000559844 ICE1Q9Y2F5 2266 aa15.05■□□□□ -0
SNX1-208ENST00000559844 DOPEY2Q9Y3R5 2298 aa15.05■□□□□ -0
SNX1-208ENST00000559844 TRAV24A0A0B4J272 114 aa15.05■□□□□ -0
SNX1-208ENST00000559844 HSPB6O14558 160 aa15.05■□□□□ -0
SNX1-208ENST00000559844 TIMM8AO60220 97 aaPredicted RBP15.05■□□□□ -0
SNX1-208ENST00000559844 IFNA21P01568 189 aa15.05■□□□□ -0
SNX1-208ENST00000559844 ZNF44P15621 663 aa15.05■□□□□ -0
SNX1-208ENST00000559844 UBA52P62987 128 aaKnown RBP15.05■□□□□ -0
SNX1-208ENST00000559844 Q6P435 159 aa15.05■□□□□ -0
SNX1-208ENST00000559844 FAM185AQ8N0U4 392 aa15.05■□□□□ -0
SNX1-208ENST00000559844 MRPL30Q8TCC3 161 aaKnown RBP15.05■□□□□ -0
SNX1-208ENST00000559844 RTN4IP1Q8WWV3 396 aaPredicted RBP15.05■□□□□ -0
SNX1-208ENST00000559844 TREM2Q9NZC2 230 aa15.05■□□□□ -0
SNX1-208ENST00000559844 NDRG3Q9UGV2 375 aa15.05■□□□□ -0
SNX1-208ENST00000559844 KLF2Q9Y5W3 355 aaPredicted RBP15.05■□□□□ -0
SNX1-208ENST00000559844 TRBV6-7A0A0A0MS04 114 aa15.04■□□□□ -0
SNX1-208ENST00000559844 RPS10-NUDT3A0A1W2PQS6 291 aa15.04■□□□□ -0
SNX1-208ENST00000559844 HS3ST1O14792 307 aa15.04■□□□□ -0
SNX1-208ENST00000559844 PET100P0DJ07 73 aa15.04■□□□□ -0
SNX1-208ENST00000559844 IGSF11Q5DX21 431 aa15.04■□□□□ -0
SNX1-208ENST00000559844 SHEQ5VZ18 495 aa15.04■□□□□ -0
SNX1-208ENST00000559844 SCARB1Q8WTV0 552 aa15.04■□□□□ -0
SNX1-208ENST00000559844 RDH5Q92781 318 aa15.04■□□□□ -0
SNX1-208ENST00000559844 SLC2A9Q9NRM0 540 aa15.04■□□□□ -0
SNX1-208ENST00000559844 RASL12Q9NYN1 266 aa15.04■□□□□ -0
SNX1-208ENST00000559844 A1L4Q6 167 aa15.04■□□□□ -0
SNX1-208ENST00000559844 RNF222A6NCQ9 220 aa15.04■□□□□ -0
SNX1-208ENST00000559844 CDIPTO14735 213 aa15.04■□□□□ -0
SNX1-208ENST00000559844 BCL2L11O43521 198 aa15.04■□□□□ -0
SNX1-208ENST00000559844 NXPH2O95156 264 aa15.04■□□□□ -0
SNX1-208ENST00000559844 HOXB5P09067 269 aa15.04■□□□□ -0
SNX1-208ENST00000559844 MZT1Q08AG7 82 aa15.04■□□□□ -0
SNX1-208ENST00000559844 SPIN3Q5JUX0 258 aa15.04■□□□□ -0
SNX1-208ENST00000559844 ZNF880Q6PDB4 577 aa15.04■□□□□ -0
SNX1-208ENST00000559844 WFDC8Q8IUA0 241 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms