RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 Q8NFD4 153 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 OR51A2Q8NGJ7 313 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 OR13A1Q8NGR1 328 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 TMEM106AQ96A25 262 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 PHF21AQ96BD5 680 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 SLC29A1Q99808 456 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 METTL9Q9H1A3 318 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 TMEM138Q9NPI0 162 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 SMPD3Q9NY59 655 aaPredicted RBP9.78□□□□□ -0.84
SPG11-219ENST00000559822 TAS2R4Q9NYW5 299 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 IL36GQ9NZH8 169 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 NPIPB11E5RHQ5 1161 aa9.77□□□□□ -0.85
SPG11-219ENST00000559822 ZNF780AO75290 641 aaPredicted RBP9.77□□□□□ -0.85
SPG11-219ENST00000559822 OR7C1O76099 320 aaPredicted RBP9.77□□□□□ -0.85
SPG11-219ENST00000559822 MYL12AP19105 171 aa9.77□□□□□ -0.85
SPG11-219ENST00000559822 ZNF93P35789 620 aaPredicted RBP9.77□□□□□ -0.85
SPG11-219ENST00000559822 GTF2A1P52655 376 aaPredicted RBP9.77□□□□□ -0.85
SPG11-219ENST00000559822 HES1Q14469 280 aa9.77□□□□□ -0.85
SPG11-219ENST00000559822 NHLRC3Q5JS37 347 aa9.77□□□□□ -0.85
SPG11-219ENST00000559822 KHDC1LQ5JSQ8 128 aa9.77□□□□□ -0.85
SPG11-219ENST00000559822 DDI2Q5TDH0 399 aa9.77□□□□□ -0.85
SPG11-219ENST00000559822 RSBN1Q5VWQ0 802 aaPredicted RBP9.77□□□□□ -0.85
SPG11-219ENST00000559822 OSR2Q8N2R0 312 aa9.77□□□□□ -0.85
SPG11-219ENST00000559822 OR10X1Q8NGY0 326 aa9.77□□□□□ -0.85
SPG11-219ENST00000559822 MRGPRDQ8TDS7 321 aa9.77□□□□□ -0.85
SPG11-219ENST00000559822 APH1BQ8WW43 257 aa9.77□□□□□ -0.85
SPG11-219ENST00000559822 MYDGFQ969H8 173 aa9.77□□□□□ -0.85
SPG11-219ENST00000559822 RCC1LQ96I51 464 aaKnown RBP9.77□□□□□ -0.85
SPG11-219ENST00000559822 DPCDQ9BVM2 203 aaPredicted RBP9.77□□□□□ -0.85
SPG11-219ENST00000559822 GPR61Q9BZJ8 451 aa9.77□□□□□ -0.85
SPG11-219ENST00000559822 IFT22Q9H7X7 185 aa9.77□□□□□ -0.85
SPG11-219ENST00000559822 ST3GAL6Q9Y274 331 aa9.77□□□□□ -0.85
SPG11-219ENST00000559822 EXOSC1Q9Y3B2 195 aaKnown RBP9.77□□□□□ -0.85
SPG11-219ENST00000559822 TMEM30CPA0ZSE6 113 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 PSMB11A5LHX3 300 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 FAM90A18PA6NE21 464 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 FAM90A16PA6NEW6 464 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 FAM90A20PA6NIJ5 464 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 FAM90A9PA6NNJ1 464 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 FAM90A12PA8MX19 464 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 FAM90A5PA8MXJ8 464 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 FGF16O43320 207 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 AMY1AP04745 511 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 AMY2AP04746 511 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 SNRNP70P08621 437 aaKnown RBP9.76□□□□□ -0.85
SPG11-219ENST00000559822 FAM90A15PP0C7V4 464 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 FAM90A13PP0C7W8 464 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 FAM90A14PP0C7W9 464 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 FAM90A24PP0C7X0 464 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 TMEM11P17152 192 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 GZMHP20718 246 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 BDKRB2P30411 391 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 RBM11P57052 281 aaKnown RBP9.76□□□□□ -0.85
SPG11-219ENST00000559822 MPV17LQ2QL34 196 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 PIGYQ3MUY2 71 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 TCTEX1D4Q5JR98 221 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 SUMF2Q8NBJ7 301 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 OR51D1Q8NGF3 324 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 OR10K1Q8NGX5 313 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 OR52N1Q8NH53 320 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 OR56B4Q8NH76 319 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 CHPT1Q8WUD6 406 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 RGP1Q92546 391 aaPredicted RBP9.76□□□□□ -0.85
SPG11-219ENST00000559822 SMIM19Q96E16 107 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 RAB9BQ9NP90 201 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 AURKAIP1Q9NWT8 199 aaPredicted RBP9.76□□□□□ -0.85
SPG11-219ENST00000559822 CHCHD3Q9NX63 227 aaKnown RBP9.76□□□□□ -0.85
SPG11-219ENST00000559822 CKLFQ9UBR5 152 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 ING4Q9UNL4 249 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 PSG11Q9UQ72 335 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 ZNF281Q9Y2X9 895 aa9.76□□□□□ -0.85
SPG11-219ENST00000559822 A0A1W2PPI3 338 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 EBAG9O00559 213 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 WBP4O75554 376 aaKnown RBP9.75□□□□□ -0.85
SPG11-219ENST00000559822 BAG2O95816 211 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 IGLL1P15814 213 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 SLC6A1P30531 599 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 GNG10P50151 68 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 ETV1P50549 477 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 SLC35B1P78383 322 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 RIPK1Q13546 671 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 GPR176Q14439 515 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 LTC4SQ16873 150 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 FOXB2Q5VYV0 432 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 STX19Q8N4C7 294 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 COMMD1Q8N668 190 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 DRAM1Q8N682 238 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 SETD9Q8NE22 299 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 OR52M1Q8NGK5 317 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 RFESDQ8TAC1 157 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 PLPPR1Q8TBJ4 325 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 LEAP2Q969E1 77 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 SPACA1Q9HBV2 294 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 C8orf4Q9NR00 106 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 BABAM2Q9NXR7 383 aa9.75□□□□□ -0.85
SPG11-219ENST00000559822 DIMT1Q9UNQ2 313 aaKnown RBP9.75□□□□□ -0.85
SPG11-219ENST00000559822 SH2D7A6NKC9 451 aaPredicted RBP9.74□□□□□ -0.85
SPG11-219ENST00000559822 HSD17B6O14756 317 aa9.74□□□□□ -0.85
SPG11-219ENST00000559822 OGG1O15527 345 aa9.74□□□□□ -0.85
SPG11-219ENST00000559822 CDRT1O95170 752 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms