RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 SLC35B1P78383 322 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 EBI3Q14213 229 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 IL13RA2Q14627 380 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 ZNF691Q5VV52 312 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 RSBN1Q5VWQ0 802 aaPredicted RBP10.32□□□□□ -0.76
TPM1-220ENST00000559556 SLC16A12Q6ZSM3 486 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 SLC35E3Q7Z769 313 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 ZNF695Q8IW36 515 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 SERPINA12Q8IW75 414 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 STPG2Q8N412 459 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 PARP16Q8N5Y8 322 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 ACBD7Q8N6N7 88 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 PXT1Q8NFP0 134 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 OR10A7Q8NGE5 316 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 CNIH3Q8TBE1 160 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 C4orf36Q96KX1 117 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 EXOGQ9Y2C4 368 aaKnown RBP10.32□□□□□ -0.76
TPM1-220ENST00000559556 SACSQ9NZJ4 4579 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 IGKV1D-33P01593 117 aa10.31□□□□□ -0.76
TPM1-220ENST00000559556 IGKV1-33P01594 117 aa10.31□□□□□ -0.76
TPM1-220ENST00000559556 IGHV3-7P01780 117 aa10.31□□□□□ -0.76
TPM1-220ENST00000559556 ALPLP05186 524 aa10.31□□□□□ -0.76
TPM1-220ENST00000559556 RPSAP08865 295 aaKnown RBP10.31□□□□□ -0.76
TPM1-220ENST00000559556 SSTR5P35346 364 aa10.31□□□□□ -0.76
TPM1-220ENST00000559556 GNG10P50151 68 aa10.31□□□□□ -0.76
TPM1-220ENST00000559556 GP2P55259 537 aaKnown RBP10.31□□□□□ -0.76
TPM1-220ENST00000559556 ZNF816Q0VGE8 651 aaPredicted RBP10.31□□□□□ -0.76
TPM1-220ENST00000559556 MEDAGQ5VYS4 303 aa10.31□□□□□ -0.76
TPM1-220ENST00000559556 UNQ9370/PRO34162Q6UXP9 181 aa10.31□□□□□ -0.76
TPM1-220ENST00000559556 FOXRED2Q8IWF2 684 aa10.31□□□□□ -0.76
TPM1-220ENST00000559556 IZUMO1Q8IYV9 350 aa10.31□□□□□ -0.76
TPM1-220ENST00000559556 Q8NFD4 153 aa10.31□□□□□ -0.76
TPM1-220ENST00000559556 OR5D14Q8NGL3 314 aa10.31□□□□□ -0.76
TPM1-220ENST00000559556 PLPPR1Q8TBJ4 325 aa10.31□□□□□ -0.76
TPM1-220ENST00000559556 CPNE2Q96FN4 548 aaPredicted RBP10.31□□□□□ -0.76
TPM1-220ENST00000559556 RAX2Q96IS3 184 aa10.31□□□□□ -0.76
TPM1-220ENST00000559556 BARHL1Q9BZE3 327 aa10.31□□□□□ -0.76
TPM1-220ENST00000559556 LINC00527Q9UJ94 153 aa10.31□□□□□ -0.76
TPM1-220ENST00000559556 TMEM212A6NML5 194 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 AP4M1O00189 453 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 HSD17B6O14756 317 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 ZFPL1O95159 310 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 DGCR2P98153 550 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 GALEQ14376 348 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 HNF4GQ14541 408 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 C1orf146Q5VVC0 180 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 ZNF529Q6P280 563 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 TEX38Q6PEX7 206 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 TGIF2LXQ8IUE1 241 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 C10orf67Q8IYJ2 551 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 SYS1Q8N2H4 156 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 Q8N6K4 173 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 OR10X1Q8NGY0 326 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 MRGPRDQ8TDS7 321 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 MRPL48Q96GC5 212 aaKnown RBP10.3□□□□□ -0.76
TPM1-220ENST00000559556 NR1H4Q96RI1 486 aaPredicted RBP10.3□□□□□ -0.76
TPM1-220ENST00000559556 ALG8Q9BVK2 526 aa10.3□□□□□ -0.76
TPM1-220ENST00000559556 IGHV1-3A0A0C4DH29 117 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 SAC3D1A6NKF1 404 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 CCL24O00175 119 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 GABRPO00591 440 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 RAMP3O60896 148 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 CIB2O75838 187 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 NHLRC4P0CG21 123 aaPredicted RBP10.29□□□□□ -0.76
TPM1-220ENST00000559556 LTC4SQ16873 150 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 PIGYQ3MUY2 71 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 LPCAT4Q643R3 524 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 RNF152Q8N8N0 203 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 OR5AK2Q8NH90 309 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 RFESDQ8TAC1 157 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 TFAP2CQ92754 450 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 LGALS12Q96DT0 336 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 EAF1Q96JC9 268 aaPredicted RBP10.29□□□□□ -0.76
TPM1-220ENST00000559556 DUX3Q96PT4 197 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 MYCBPQ99417 103 aaPredicted RBP10.29□□□□□ -0.76
TPM1-220ENST00000559556 ABCG5Q9H222 651 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 IFT22Q9H7X7 185 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 ISG20L2Q9H9L3 353 aaKnown RBP10.29□□□□□ -0.76
TPM1-220ENST00000559556 LIN7CQ9NUP9 197 aaKnown RBP10.29□□□□□ -0.76
TPM1-220ENST00000559556 DHDHQ9UQ10 334 aa10.29□□□□□ -0.76
TPM1-220ENST00000559556 LSM4Q9Y4Z0 139 aaKnown RBP10.29□□□□□ -0.76
TPM1-220ENST00000559556 LINC01548A6NM66 108 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 SNTNA6NMZ2 147 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 GAPDHP04406 335 aaKnown RBP10.28□□□□□ -0.76
TPM1-220ENST00000559556 RPLP1P05386 114 aaKnown RBP10.28□□□□□ -0.76
TPM1-220ENST00000559556 RAB3AP20336 220 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 GPR12P47775 334 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 MRPL28Q13084 256 aaKnown RBP10.28□□□□□ -0.76
TPM1-220ENST00000559556 FOXE3Q13461 319 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 RSU1Q15404 277 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 NHLRC3Q5JS37 347 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 ASCL4Q6XD76 172 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 LHFPL3Q86UP9 236 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 LINC00311Q8N616 119 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 C8orf31Q8N9H6 132 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 Q8N9W7 124 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 TMEM104Q8NE00 496 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 OR51A2Q8NGJ7 313 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 OR52M1Q8NGK5 317 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 OR8U1Q8NH10 309 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms