RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 PRRX1P54821 245 aa10.15□□□□□ -0.78
LRRC28-214ENST00000559433 GPR176Q14439 515 aa10.15□□□□□ -0.78
LRRC28-214ENST00000559433 MED22Q15528 200 aa10.15□□□□□ -0.78
LRRC28-214ENST00000559433 C17orf58Q2M2W7 97 aa10.15□□□□□ -0.78
LRRC28-214ENST00000559433 AWAT2Q6E213 333 aa10.15□□□□□ -0.78
LRRC28-214ENST00000559433 GLIPR1L1Q6UWM5 242 aa10.15□□□□□ -0.78
LRRC28-214ENST00000559433 TMEM219Q86XT9 240 aa10.15□□□□□ -0.78
LRRC28-214ENST00000559433 OR13A1Q8NGR1 328 aa10.15□□□□□ -0.78
LRRC28-214ENST00000559433 PLPPR1Q8TBJ4 325 aa10.15□□□□□ -0.78
LRRC28-214ENST00000559433 ZNF596Q8TC21 504 aa10.15□□□□□ -0.78
LRRC28-214ENST00000559433 SGCDQ92629 289 aa10.15□□□□□ -0.78
LRRC28-214ENST00000559433 CDCA4Q9BXL8 241 aa10.15□□□□□ -0.78
LRRC28-214ENST00000559433 NCOR1P1Q9H4R4 102 aa10.15□□□□□ -0.78
LRRC28-214ENST00000559433 CALYQ9NYX4 217 aa10.15□□□□□ -0.78
LRRC28-214ENST00000559433 SIGLEC9Q9Y336 463 aa10.15□□□□□ -0.78
LRRC28-214ENST00000559433 TPRKBQ9Y3C4 175 aa10.15□□□□□ -0.78
LRRC28-214ENST00000559433 TET2Q6N021 2002 aaPredicted RBP10.14□□□□□ -0.79
LRRC28-214ENST00000559433 A0A1W2PP11 408 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 A6NDX4 124 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 H0YHG0 523 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 PIN1P1O15428 100 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 MYF6P23409 242 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 CD34P28906 385 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 BRS3P32247 399 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 SLC35A2P78381 396 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 PAX5Q02548 391 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 RBM39Q14498 530 aaKnown RBP10.14□□□□□ -0.79
LRRC28-214ENST00000559433 SPHARQ15513 63 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 MPV17LQ2QL34 196 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 ATAD3CQ5T2N8 411 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 CCBE1Q6UXH8 406 aaPredicted RBP10.14□□□□□ -0.79
LRRC28-214ENST00000559433 IZUMO2Q6UXV1 221 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 CDH26Q8IXH8 852 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 NKAIN3Q8N8D7 197 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 MRGPRDQ8TDS7 321 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 NEK7Q8TDX7 302 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 CREB3L1Q96BA8 519 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 KIRREL1Q96J84 757 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 OR5M11Q96RB7 305 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 TMED9Q9BVK6 235 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 ANKRD60Q9BZ19 345 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 DPM3Q9P2X0 92 aa10.14□□□□□ -0.79
LRRC28-214ENST00000559433 LSM2Q9Y333 95 aaKnown RBP10.14□□□□□ -0.79
LRRC28-214ENST00000559433 A0A087X0M5 115 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 TRAV39A0A0B4J263 110 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 A0A1B0GX30 115 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 TMEM30CPA0ZSE6 113 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 LEUTXA8MZ59 168 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 IL1AP01583 271 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 IGLV1-47P01700 117 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 CGB3P0DN86 165 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 CGB7P0DN87 165 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 VSIG10L2P0DP72 767 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 SSTR5P35346 364 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 CEACAM3P40198 252 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 HSPA13P48723 471 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 EFNB2P52799 333 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 INSL4Q14641 139 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 IRF3Q14653 427 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 HERPUD1Q15011 391 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 LTC4SQ16873 150 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 C2orf68Q2NKX9 166 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 HLA-DRB5Q30154 266 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 ACSM3Q53FZ2 586 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 UTF1Q5T230 341 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 MS4A15Q8N5U1 240 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 LEAP2Q969E1 77 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 PRSS22Q9GZN4 317 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 MMP27Q9H306 513 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 IDI2-AS1Q9NZ38 188 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 MEGF8Q7Z7M0 2845 aa10.13□□□□□ -0.79
LRRC28-214ENST00000559433 MEGF11A6BM72 1044 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 BUB1B-PAK6H3BSN5 160 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 RGS10O43665 173 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 CRTAPO75718 401 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-214ENST00000559433 CSF1P09603 554 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 RBM48Q5RL73 367 aaKnown RBP10.12□□□□□ -0.79
LRRC28-214ENST00000559433 TPTE2P1Q5T6R2 138 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 FAM27D1Q5T7N8 215 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 KLHDC1Q8N7A1 406 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 OR9G1Q8NH87 305 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 RFESDQ8TAC1 157 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 FAM110DQ8TAY7 271 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-214ENST00000559433 UFD1Q92890 307 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 MRPS24Q96EL2 167 aaKnown RBP10.12□□□□□ -0.79
LRRC28-214ENST00000559433 AKR1E2Q96JD6 320 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 UQCC2Q9BRT2 126 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 CCDC90BQ9GZT6 254 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 MMP28Q9H239 520 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 BANF2Q9H503 90 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 LINC00574Q9H8X3 128 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 ZNF702PQ9H963 129 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 SPACA1Q9HBV2 294 aa10.12□□□□□ -0.79
LRRC28-214ENST00000559433 AMMECR1Q9Y4X0 333 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-214ENST00000559433 FAM90A22PA8MWA6 464 aa10.11□□□□□ -0.79
LRRC28-214ENST00000559433 NPIPB11E5RHQ5 1161 aa10.11□□□□□ -0.79
LRRC28-214ENST00000559433 AIPO00170 330 aa10.11□□□□□ -0.79
LRRC28-214ENST00000559433 IGHV3-7P01780 117 aa10.11□□□□□ -0.79
LRRC28-214ENST00000559433 HSMCR30P0CW71 290 aa10.11□□□□□ -0.79
LRRC28-214ENST00000559433 MGMTP16455 207 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms