RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 RAB13P51153 203 aa8.82□□□□□ -1
SPG11-216ENST00000559347 INSL4Q14641 139 aa8.82□□□□□ -1
SPG11-216ENST00000559347 IRF3Q14653 427 aa8.82□□□□□ -1
SPG11-216ENST00000559347 MPV17LQ2QL34 196 aa8.82□□□□□ -1
SPG11-216ENST00000559347 HLA-DRB5Q30154 266 aa8.82□□□□□ -1
SPG11-216ENST00000559347 SLC22A6Q4U2R8 563 aa8.82□□□□□ -1
SPG11-216ENST00000559347 UTF1Q5T230 341 aa8.82□□□□□ -1
SPG11-216ENST00000559347 CCBE1Q6UXH8 406 aaPredicted RBP8.82□□□□□ -1
SPG11-216ENST00000559347 IZUMO2Q6UXV1 221 aa8.82□□□□□ -1
SPG11-216ENST00000559347 CDH26Q8IXH8 852 aa8.82□□□□□ -1
SPG11-216ENST00000559347 SUMF2Q8NBJ7 301 aa8.82□□□□□ -1
SPG11-216ENST00000559347 OR4D6Q8NGJ1 314 aa8.82□□□□□ -1
SPG11-216ENST00000559347 ZNF596Q8TC21 504 aa8.82□□□□□ -1
SPG11-216ENST00000559347 DPCDQ9BVM2 203 aaPredicted RBP8.82□□□□□ -1
SPG11-216ENST00000559347 NPFFR1Q9GZQ6 430 aa8.82□□□□□ -1
SPG11-216ENST00000559347 VCX3BQ9H321 246 aa8.82□□□□□ -1
SPG11-216ENST00000559347 CALYQ9NYX4 217 aa8.82□□□□□ -1
SPG11-216ENST00000559347 FBLN5Q9UBX5 448 aa8.82□□□□□ -1
SPG11-216ENST00000559347 HILPDAQ9Y5L2 63 aa8.82□□□□□ -1
SPG11-216ENST00000559347 H0YHG0 523 aa8.81□□□□□ -1
SPG11-216ENST00000559347 SC5DO75845 299 aa8.81□□□□□ -1
SPG11-216ENST00000559347 GTF2F2P13984 249 aa8.81□□□□□ -1
SPG11-216ENST00000559347 SSTR5P35346 364 aa8.81□□□□□ -1
SPG11-216ENST00000559347 HSPA13P48723 471 aa8.81□□□□□ -1
SPG11-216ENST00000559347 EFNB2P52799 333 aa8.81□□□□□ -1
SPG11-216ENST00000559347 GP2P55259 537 aaKnown RBP8.81□□□□□ -1
SPG11-216ENST00000559347 GPR176Q14439 515 aa8.81□□□□□ -1
SPG11-216ENST00000559347 SPHARQ15513 63 aa8.81□□□□□ -1
SPG11-216ENST00000559347 MED22Q15528 200 aa8.81□□□□□ -1
SPG11-216ENST00000559347 FAM27D1Q5T7N8 215 aa8.81□□□□□ -1
SPG11-216ENST00000559347 AWAT2Q6E213 333 aa8.81□□□□□ -1
SPG11-216ENST00000559347 GLIPR1L1Q6UWM5 242 aa8.81□□□□□ -1
SPG11-216ENST00000559347 TREML4Q6UXN2 200 aa8.81□□□□□ -1
SPG11-216ENST00000559347 TMEM219Q86XT9 240 aa8.81□□□□□ -1
SPG11-216ENST00000559347 MS4A15Q8N5U1 240 aa8.81□□□□□ -1
SPG11-216ENST00000559347 MRGPRDQ8TDS7 321 aa8.81□□□□□ -1
SPG11-216ENST00000559347 TMED9Q9BVK6 235 aa8.81□□□□□ -1
SPG11-216ENST00000559347 BARHL1Q9BZE3 327 aa8.81□□□□□ -1
SPG11-216ENST00000559347 DUSP21Q9H596 190 aa8.81□□□□□ -1
SPG11-216ENST00000559347 LINC00574Q9H8X3 128 aa8.81□□□□□ -1
SPG11-216ENST00000559347 ZNF702PQ9H963 129 aa8.81□□□□□ -1
SPG11-216ENST00000559347 RCC2Q9P258 522 aaKnown RBP8.81□□□□□ -1
SPG11-216ENST00000559347 PITPNC1Q9UKF7 332 aa8.81□□□□□ -1
SPG11-216ENST00000559347 SIGLEC9Q9Y336 463 aa8.81□□□□□ -1
SPG11-216ENST00000559347 TPRKBQ9Y3C4 175 aa8.81□□□□□ -1
SPG11-216ENST00000559347 NPIPB11E5RHQ5 1161 aa8.8□□□□□ -1
SPG11-216ENST00000559347 RGS10O43665 173 aa8.8□□□□□ -1
SPG11-216ENST00000559347 MGMTP16455 207 aa8.8□□□□□ -1
SPG11-216ENST00000559347 CRHBPP24387 322 aa8.8□□□□□ -1
SPG11-216ENST00000559347 NFYBP25208 207 aa8.8□□□□□ -1
SPG11-216ENST00000559347 KIR2DS4P43632 304 aa8.8□□□□□ -1
SPG11-216ENST00000559347 ACSM3Q53FZ2 586 aa8.8□□□□□ -1
SPG11-216ENST00000559347 ATAD3CQ5T2N8 411 aa8.8□□□□□ -1
SPG11-216ENST00000559347 UNQ9370/PRO34162Q6UXP9 181 aa8.8□□□□□ -1
SPG11-216ENST00000559347 ZNF565Q8N9K5 539 aa8.8□□□□□ -1
SPG11-216ENST00000559347 OR9G1Q8NH87 305 aa8.8□□□□□ -1
SPG11-216ENST00000559347 OR2T6Q8NHC8 308 aa8.8□□□□□ -1
SPG11-216ENST00000559347 MRPS24Q96EL2 167 aaKnown RBP8.8□□□□□ -1
SPG11-216ENST00000559347 Q96M66 194 aa8.8□□□□□ -1
SPG11-216ENST00000559347 UQCC2Q9BRT2 126 aa8.8□□□□□ -1
SPG11-216ENST00000559347 MMP28Q9H239 520 aa8.8□□□□□ -1
SPG11-216ENST00000559347 TCF7L1Q9HCS4 588 aa8.8□□□□□ -1
SPG11-216ENST00000559347 PCDHB16Q9NRJ7 776 aa8.8□□□□□ -1
SPG11-216ENST00000559347 IDI2-AS1Q9NZ38 188 aa8.8□□□□□ -1
SPG11-216ENST00000559347 DPM3Q9P2X0 92 aa8.8□□□□□ -1
SPG11-216ENST00000559347 WNK1Q9H4A3 2382 aa8.79□□□□□ -1
SPG11-216ENST00000559347 TRAV39A0A0B4J263 110 aa8.79□□□□□ -1
SPG11-216ENST00000559347 TMEM30CPA0ZSE6 113 aa8.79□□□□□ -1
SPG11-216ENST00000559347 FAM90A22PA8MWA6 464 aa8.79□□□□□ -1
SPG11-216ENST00000559347 LEUTXA8MZ59 168 aa8.79□□□□□ -1
SPG11-216ENST00000559347 BUB1B-PAK6H3BSN5 160 aa8.79□□□□□ -1
SPG11-216ENST00000559347 TOR1AO14656 332 aa8.79□□□□□ -1
SPG11-216ENST00000559347 TIMM23O14925 209 aa8.79□□□□□ -1
SPG11-216ENST00000559347 CEACAM3P40198 252 aa8.79□□□□□ -1
SPG11-216ENST00000559347 GPR50Q13585 617 aa8.79□□□□□ -1
SPG11-216ENST00000559347 FBLN7Q53RD9 439 aa8.79□□□□□ -1
SPG11-216ENST00000559347 RBM48Q5RL73 367 aaKnown RBP8.79□□□□□ -1
SPG11-216ENST00000559347 TPTE2P1Q5T6R2 138 aa8.79□□□□□ -1
SPG11-216ENST00000559347 LIPKQ5VXJ0 399 aa8.79□□□□□ -1
SPG11-216ENST00000559347 C11orf88Q6PI97 169 aa8.79□□□□□ -1
SPG11-216ENST00000559347 ZNF497Q6ZNH5 498 aa8.79□□□□□ -1
SPG11-216ENST00000559347 PRSS48Q7RTY5 328 aa8.79□□□□□ -1
SPG11-216ENST00000559347 LRRTM1Q86UE6 522 aa8.79□□□□□ -1
SPG11-216ENST00000559347 Q8N2B8 174 aa8.79□□□□□ -1
SPG11-216ENST00000559347 KLHDC1Q8N7A1 406 aa8.79□□□□□ -1
SPG11-216ENST00000559347 TMEM104Q8NE00 496 aa8.79□□□□□ -1
SPG11-216ENST00000559347 OR10A7Q8NGE5 316 aa8.79□□□□□ -1
SPG11-216ENST00000559347 NEK7Q8TDX7 302 aa8.79□□□□□ -1
SPG11-216ENST00000559347 PHYHIPQ92561 330 aa8.79□□□□□ -1
SPG11-216ENST00000559347 UFD1Q92890 307 aa8.79□□□□□ -1
SPG11-216ENST00000559347 CREB3L1Q96BA8 519 aa8.79□□□□□ -1
SPG11-216ENST00000559347 BANF2Q9H503 90 aa8.79□□□□□ -1
SPG11-216ENST00000559347 SPACA1Q9HBV2 294 aa8.79□□□□□ -1
SPG11-216ENST00000559347 FAM90A10PA6NDY2 464 aa8.78□□□□□ -1
SPG11-216ENST00000559347 FAM90A18PA6NE21 464 aa8.78□□□□□ -1
SPG11-216ENST00000559347 FAM90A16PA6NEW6 464 aa8.78□□□□□ -1
SPG11-216ENST00000559347 FAM90A20PA6NIJ5 464 aa8.78□□□□□ -1
SPG11-216ENST00000559347 FAM90A7PA6NKC0 464 aa8.78□□□□□ -1
SPG11-216ENST00000559347 FAM90A12PA8MX19 464 aa8.78□□□□□ -1
SPG11-216ENST00000559347 FAM90A5PA8MXJ8 464 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms