RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 DERL3Q96Q80 235 aa9.71□□□□□ -0.86
TPM1-216ENST00000558910 DPCDQ9BVM2 203 aaPredicted RBP9.71□□□□□ -0.86
TPM1-216ENST00000558910 CLEC7AQ9BXN2 247 aa9.71□□□□□ -0.86
TPM1-216ENST00000558910 ZNF286AQ9HBT8 521 aa9.71□□□□□ -0.86
TPM1-216ENST00000558910 FKBP14Q9NWM8 211 aa9.71□□□□□ -0.86
TPM1-216ENST00000558910 UBE2J1Q9Y385 318 aaPredicted RBP9.71□□□□□ -0.86
TPM1-216ENST00000558910 TPRKBQ9Y3C4 175 aa9.71□□□□□ -0.86
TPM1-216ENST00000558910 CMYA5Q8N3K9 4069 aa9.71□□□□□ -0.86
TPM1-216ENST00000558910 TRBV5-7A0A0A0MS05 114 aa9.7□□□□□ -0.86
TPM1-216ENST00000558910 ODF3BA8MYP8 253 aa9.7□□□□□ -0.86
TPM1-216ENST00000558910 F2RL2O00254 374 aa9.7□□□□□ -0.86
TPM1-216ENST00000558910 CHST1O43916 411 aa9.7□□□□□ -0.86
TPM1-216ENST00000558910 CRTAPO75718 401 aaPredicted RBP9.7□□□□□ -0.86
TPM1-216ENST00000558910 NDUFA7O95182 113 aa9.7□□□□□ -0.86
TPM1-216ENST00000558910 ALDOBP05062 364 aa9.7□□□□□ -0.86
TPM1-216ENST00000558910 LMO1P25800 156 aa9.7□□□□□ -0.86
TPM1-216ENST00000558910 ERP29P30040 261 aaKnown RBP9.7□□□□□ -0.86
TPM1-216ENST00000558910 GABRA5P31644 462 aa9.7□□□□□ -0.86
TPM1-216ENST00000558910 RBM11P57052 281 aaKnown RBP9.7□□□□□ -0.86
TPM1-216ENST00000558910 HABP2Q14520 560 aaPredicted RBP9.7□□□□□ -0.86
TPM1-216ENST00000558910 RBM48Q5RL73 367 aaKnown RBP9.7□□□□□ -0.86
TPM1-216ENST00000558910 ZNF626Q68DY1 528 aa9.7□□□□□ -0.86
TPM1-216ENST00000558910 CEACAM19Q7Z692 300 aa9.7□□□□□ -0.86
TPM1-216ENST00000558910 CHST4Q8NCG5 386 aa9.7□□□□□ -0.86
TPM1-216ENST00000558910 BARHL1Q9BZE3 327 aa9.7□□□□□ -0.86
TPM1-216ENST00000558910 VCX3BQ9H321 246 aa9.7□□□□□ -0.86
TPM1-216ENST00000558910 KCNK15Q9H427 330 aa9.7□□□□□ -0.86
TPM1-216ENST00000558910 FOXJ3Q9UPW0 622 aa9.7□□□□□ -0.86
TPM1-216ENST00000558910 IGHV3-43A0A0B4J1X8 118 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 SH2D7A6NKC9 451 aaPredicted RBP9.69□□□□□ -0.86
TPM1-216ENST00000558910 RGS10O43665 173 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 ATP6V1G2O95670 118 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 IGHV3-43DP0DP04 118 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 VSIG10L2P0DP72 767 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 MYF6P23409 242 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 SSTR5P35346 364 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 RPS25P62851 125 aaKnown RBP9.69□□□□□ -0.86
TPM1-216ENST00000558910 IL13RA2Q14627 380 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 SPHARQ15513 63 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 C17orf58Q2M2W7 97 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 ELP2Q6IA86 826 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 OR10K2Q6IF99 312 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 FAM53AQ6NSI3 398 aaPredicted RBP9.69□□□□□ -0.86
TPM1-216ENST00000558910 CCBE1Q6UXH8 406 aaPredicted RBP9.69□□□□□ -0.86
TPM1-216ENST00000558910 LYG1Q8N1E2 194 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 PRR18Q8N4B5 295 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 OR11H6Q8NGC7 330 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 OR51T1Q8NGJ9 327 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 SGMS2Q8NHU3 365 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 PIFOQ8TCI5 191 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 PKD1L1Q8TDX9 2849 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 UFD1Q92890 307 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 SELENOIQ9C0D9 397 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 MEGF9Q9H1U4 602 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 TCF7L1Q9HCS4 588 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 CALYQ9NYX4 217 aa9.69□□□□□ -0.86
TPM1-216ENST00000558910 TBL2Q9Y4P3 447 aaKnown RBP9.69□□□□□ -0.86
TPM1-216ENST00000558910 UBE2QL1A1L167 161 aa9.68□□□□□ -0.86
TPM1-216ENST00000558910 MPIG6BO95866 241 aa9.68□□□□□ -0.86
TPM1-216ENST00000558910 GTF2F2P13984 249 aa9.68□□□□□ -0.86
TPM1-216ENST00000558910 HTR1DP28221 377 aa9.68□□□□□ -0.86
TPM1-216ENST00000558910 RSBN1Q5VWQ0 802 aaPredicted RBP9.68□□□□□ -0.86
TPM1-216ENST00000558910 HEPN1Q6WQI6 88 aa9.68□□□□□ -0.86
TPM1-216ENST00000558910 ASCL4Q6XD76 172 aa9.68□□□□□ -0.86
TPM1-216ENST00000558910 C5orf24Q7Z6I8 188 aa9.68□□□□□ -0.86
TPM1-216ENST00000558910 TMEM104Q8NE00 496 aa9.68□□□□□ -0.86
TPM1-216ENST00000558910 OR4P4Q8NGL7 312 aa9.68□□□□□ -0.86
TPM1-216ENST00000558910 OR4C13Q8NGP0 309 aa9.68□□□□□ -0.86
TPM1-216ENST00000558910 MALSU1Q96EH3 234 aa9.68□□□□□ -0.86
TPM1-216ENST00000558910 SEBOXQ9HB31 216 aaPredicted RBP9.68□□□□□ -0.86
TPM1-216ENST00000558910 RHOFQ9HBH0 211 aa9.68□□□□□ -0.86
TPM1-216ENST00000558910 TAS2R3Q9NYW6 316 aa9.68□□□□□ -0.86
TPM1-216ENST00000558910 IDI2-AS1Q9NZ38 188 aa9.68□□□□□ -0.86
TPM1-216ENST00000558910 OR6C3Q9NZP0 311 aa9.68□□□□□ -0.86
TPM1-216ENST00000558910 LSM2Q9Y333 95 aaKnown RBP9.68□□□□□ -0.86
TPM1-216ENST00000558910 MMP24Q9Y5R2 645 aa9.68□□□□□ -0.86
TPM1-216ENST00000558910 MGAM2Q2M2H8 2515 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 DSCAML1Q8TD84 2053 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 KBTBD11-OT1A0A1B0GTJ5 212 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 A0A1B0GUS0 222 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 TMEM238LA0A1B0GVL6 79 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 FAM90A8PA6NJQ4 464 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 ZNF729A6NN14 1252 aaPredicted RBP9.67□□□□□ -0.86
TPM1-216ENST00000558910 EIF4EBP3O60516 100 aaPredicted RBP9.67□□□□□ -0.86
TPM1-216ENST00000558910 RBP4P02753 201 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 MGMTP16455 207 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 MAPK3P27361 379 aaPredicted RBP9.67□□□□□ -0.86
TPM1-216ENST00000558910 SLC35A2P78381 396 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 GPR50Q13585 617 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 TMEM95Q3KNT9 176 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 HSD17B12Q53GQ0 312 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 FBLN7Q53RD9 439 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 C9orf152Q5JTZ5 239 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 OR52W1Q6IF63 320 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 ZNF565Q8N9K5 539 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 OR4K15Q8NH41 348 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 FAM110DQ8TAY7 271 aaPredicted RBP9.67□□□□□ -0.86
TPM1-216ENST00000558910 CAPSLQ8WWF8 208 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 CORO2AQ92828 525 aa9.67□□□□□ -0.86
TPM1-216ENST00000558910 RBMXL1Q96E39 390 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms