RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 FOXJ3Q9UPW0 622 aa12.45□□□□□ -0.42
CSHL1-208ENST00000558609 TRAV8-7A0A075B6U6 113 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 FAM172BPA6NC97 362 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 LY6LH3BQJ8 138 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 BUB1B-PAK6H3BSN5 160 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 TOR1AO14656 332 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 MYL12BO14950 172 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 ZNF780AO75290 641 aaPredicted RBP12.44□□□□□ -0.42
CSHL1-208ENST00000558609 TSPAN15O95858 294 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 BRS3P32247 399 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 CEACAM3P40198 252 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 GLP1RP43220 463 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 HSPA13P48723 471 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 WNT4P56705 351 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 HLA-DRB5Q30154 266 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 CDH26Q8IXH8 852 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 NANOGP1Q8N7R0 232 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 SUMF2Q8NBJ7 301 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 PLPPR1Q8TBJ4 325 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 KIRREL1Q96J84 757 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 DPCDQ9BVM2 203 aaPredicted RBP12.44□□□□□ -0.42
CSHL1-208ENST00000558609 CALYQ9NYX4 217 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 ZNF581Q9P0T4 197 aa12.44□□□□□ -0.42
CSHL1-208ENST00000558609 TET2Q6N021 2002 aaPredicted RBP12.44□□□□□ -0.42
CSHL1-208ENST00000558609 MAGEA13PA6NCF6 341 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 NPIPB11E5RHQ5 1161 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 GEMIN2O14893 280 aaKnown RBP12.43□□□□□ -0.42
CSHL1-208ENST00000558609 OR7C1O76099 320 aaPredicted RBP12.43□□□□□ -0.42
CSHL1-208ENST00000558609 IL1AP01583 271 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 CELP19835 753 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 SERPINA2P20848 420 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 NFYBP25208 207 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 ARHGDIBP52566 201 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 AQP4P55087 323 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 GPR176Q14439 515 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 HABP2Q14520 560 aaPredicted RBP12.43□□□□□ -0.42
CSHL1-208ENST00000558609 MPV17LQ2QL34 196 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 UTF1Q5T230 341 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 TPTE2P1Q5T6R2 138 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 RNLSQ5VYX0 342 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 C16orf82Q7Z2V1 217 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 OR9G1Q8NH87 305 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 DERL3Q96Q80 235 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 OR14A2Q96R54 314 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 IDI2-AS1Q9NZ38 188 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 ERGIC3Q9Y282 383 aa12.43□□□□□ -0.42
CSHL1-208ENST00000558609 PNMA8CA0A1B0GUJ8 204 aa12.42□□□□□ -0.42
CSHL1-208ENST00000558609 A0A1W2PPK0 400 aa12.42□□□□□ -0.42
CSHL1-208ENST00000558609 OOSP1A8MZH6 123 aa12.42□□□□□ -0.42
CSHL1-208ENST00000558609 CSF1P09603 554 aa12.42□□□□□ -0.42
CSHL1-208ENST00000558609 VSIG10L2P0DP72 767 aa12.42□□□□□ -0.42
CSHL1-208ENST00000558609 GTF2F2P13984 249 aa12.42□□□□□ -0.42
CSHL1-208ENST00000558609 BLCAPP62952 87 aa12.42□□□□□ -0.42
CSHL1-208ENST00000558609 DOC2BQ14184 412 aa12.42□□□□□ -0.42
CSHL1-208ENST00000558609 SLC22A6Q4U2R8 563 aa12.42□□□□□ -0.42
CSHL1-208ENST00000558609 SLC16A12Q6ZSM3 486 aa12.42□□□□□ -0.42
CSHL1-208ENST00000558609 OR10A7Q8NGE5 316 aa12.42□□□□□ -0.42
CSHL1-208ENST00000558609 MRGPRDQ8TDS7 321 aa12.42□□□□□ -0.42
CSHL1-208ENST00000558609 WIPF2Q8TF74 440 aaPredicted RBP12.42□□□□□ -0.42
CSHL1-208ENST00000558609 MRPS24Q96EL2 167 aaKnown RBP12.42□□□□□ -0.42
CSHL1-208ENST00000558609 LIN7BQ9HAP6 207 aa12.42□□□□□ -0.42
CSHL1-208ENST00000558609 LRRC42Q9Y546 428 aa12.42□□□□□ -0.42
CSHL1-208ENST00000558609 A0A1W2PP11 408 aa12.41□□□□□ -0.42
CSHL1-208ENST00000558609 J3QR06 171 aa12.41□□□□□ -0.42
CSHL1-208ENST00000558609 PIN1P1O15428 100 aa12.41□□□□□ -0.42
CSHL1-208ENST00000558609 CDK1P06493 297 aa12.41□□□□□ -0.42
CSHL1-208ENST00000558609 GZMHP20718 246 aa12.41□□□□□ -0.42
CSHL1-208ENST00000558609 C6orf141Q5SZD1 244 aa12.41□□□□□ -0.42
CSHL1-208ENST00000558609 CCDC144NLQ6NUI1 221 aa12.41□□□□□ -0.42
CSHL1-208ENST00000558609 Q6ZS46 218 aa12.41□□□□□ -0.42
CSHL1-208ENST00000558609 LYPD6Q86Y78 171 aa12.41□□□□□ -0.42
CSHL1-208ENST00000558609 C11orf44Q8N8P7 122 aa12.41□□□□□ -0.42
CSHL1-208ENST00000558609 THRSPQ92748 146 aa12.41□□□□□ -0.42
CSHL1-208ENST00000558609 MUL1Q969V5 352 aa12.41□□□□□ -0.42
CSHL1-208ENST00000558609 AKR1E2Q96JD6 320 aa12.41□□□□□ -0.42
CSHL1-208ENST00000558609 WNT10AQ9GZT5 417 aa12.41□□□□□ -0.42
CSHL1-208ENST00000558609 MMP28Q9H239 520 aa12.41□□□□□ -0.42
CSHL1-208ENST00000558609 RAB26Q9ULW5 256 aa12.41□□□□□ -0.42
CSHL1-208ENST00000558609 MRPS28Q9Y2Q9 187 aaKnown RBP12.41□□□□□ -0.42
CSHL1-208ENST00000558609 TRAV39A0A0B4J263 110 aa12.4□□□□□ -0.42
CSHL1-208ENST00000558609 TMEM30CPA0ZSE6 113 aa12.4□□□□□ -0.42
CSHL1-208ENST00000558609 MAS1P04201 325 aa12.4□□□□□ -0.42
CSHL1-208ENST00000558609 CD24P25063 80 aa12.4□□□□□ -0.42
CSHL1-208ENST00000558609 MAPK3P27361 379 aaPredicted RBP12.4□□□□□ -0.42
CSHL1-208ENST00000558609 SSTR5P35346 364 aa12.4□□□□□ -0.42
CSHL1-208ENST00000558609 RBM39Q14498 530 aaKnown RBP12.4□□□□□ -0.42
CSHL1-208ENST00000558609 ATAD3CQ5T2N8 411 aa12.4□□□□□ -0.42
CSHL1-208ENST00000558609 GLIPR1L1Q6UWM5 242 aa12.4□□□□□ -0.42
CSHL1-208ENST00000558609 JAGN1Q8N5M9 183 aa12.4□□□□□ -0.42
CSHL1-208ENST00000558609 RFESDQ8TAC1 157 aa12.4□□□□□ -0.42
CSHL1-208ENST00000558609 FAM110DQ8TAY7 271 aaPredicted RBP12.4□□□□□ -0.42
CSHL1-208ENST00000558609 MND1Q9BWT6 205 aa12.4□□□□□ -0.42
CSHL1-208ENST00000558609 SPACA1Q9HBV2 294 aa12.4□□□□□ -0.42
CSHL1-208ENST00000558609 PSG11Q9UQ72 335 aa12.4□□□□□ -0.42
CSHL1-208ENST00000558609 AMMECR1Q9Y4X0 333 aaPredicted RBP12.4□□□□□ -0.42
CSHL1-208ENST00000558609 PTGES3LE9PB15 166 aa12.39□□□□□ -0.43
CSHL1-208ENST00000558609 OR2F2O95006 317 aa12.39□□□□□ -0.43
CSHL1-208ENST00000558609 MNDAP41218 407 aa12.39□□□□□ -0.43
CSHL1-208ENST00000558609 AWAT2Q6E213 333 aa12.39□□□□□ -0.43
CSHL1-208ENST00000558609 UNQ9370/PRO34162Q6UXP9 181 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms