RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 LCATP04180 440 aa9.43□□□□□ -0.9
USP3-206ENST00000558157 DBHP09172 617 aa9.43□□□□□ -0.9
USP3-206ENST00000558157 FTH1P19P0C7X4 201 aa9.43□□□□□ -0.9
USP3-206ENST00000558157 JMJD7P0C870 316 aa9.43□□□□□ -0.9
USP3-206ENST00000558157 CT45A8P0DMV1 189 aa9.43□□□□□ -0.9
USP3-206ENST00000558157 CT45A9P0DMV2 189 aa9.43□□□□□ -0.9
USP3-206ENST00000558157 KLF3P57682 345 aaPredicted RBP9.43□□□□□ -0.9
USP3-206ENST00000558157 UBE2NP61088 152 aaKnown RBP9.43□□□□□ -0.9
USP3-206ENST00000558157 SELENOTP62341 195 aa9.43□□□□□ -0.9
USP3-206ENST00000558157 TMEM183BQ1AE95 376 aa9.43□□□□□ -0.9
USP3-206ENST00000558157 ABCA11PQ4W5N1 156 aa9.43□□□□□ -0.9
USP3-206ENST00000558157 CT45A2Q5DJT8 189 aa9.43□□□□□ -0.9
USP3-206ENST00000558157 DCAF12Q5T6F0 453 aa9.43□□□□□ -0.9
USP3-206ENST00000558157 LYZL2Q7Z4W2 148 aa9.43□□□□□ -0.9
USP3-206ENST00000558157 ZNF321PQ8N8H1 164 aa9.43□□□□□ -0.9
USP3-206ENST00000558157 ZCCHC14Q8WYQ9 949 aaKnown RBP9.43□□□□□ -0.9
USP3-206ENST00000558157 ZNF845Q96IR2 970 aaPredicted RBP9.43□□□□□ -0.9
USP3-206ENST00000558157 PECRQ9BY49 303 aa9.43□□□□□ -0.9
USP3-206ENST00000558157 PBOV1Q9GZY1 135 aa9.43□□□□□ -0.9
USP3-206ENST00000558157 DNAJC4Q9NNZ3 241 aa9.43□□□□□ -0.9
USP3-206ENST00000558157 LYRM2Q9NU23 88 aaPredicted RBP9.43□□□□□ -0.9
USP3-206ENST00000558157 HEATR5AQ86XA9 2040 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 WDFY3Q8IZQ1 3526 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 PCNX2A6NKB5 2137 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 C20orf202A1L168 122 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 MAP1LC3B2A6NCE7 125 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 VSTM2BA6NLU5 285 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 PROB1E7EW31 1015 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 TCF21O43680 179 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 HRASP01112 189 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 CNN1P51911 297 aaKnown RBP9.42□□□□□ -0.9
USP3-206ENST00000558157 FUT7Q11130 342 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 IL24Q13007 206 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 CBLN3Q6UW01 205 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 TEX43Q6ZNM6 134 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 CYP2G1PQ6ZSU1 146 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 ZNF100Q8IYN0 542 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 OR51T1Q8NGJ9 327 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 ORAOV1Q8WV07 137 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 RTN4IP1Q8WWV3 396 aaPredicted RBP9.42□□□□□ -0.9
USP3-206ENST00000558157 ANAPC16Q96DE5 110 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 FOXN4Q96NZ1 517 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 SPIN2AQ99865 258 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 SPIN2BQ9BPZ2 258 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 TM2D1Q9BX74 207 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 MAP1LC3BQ9GZQ8 125 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 CALHM2Q9HA72 323 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 GPR35Q9HC97 309 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 AURKAIP1Q9NWT8 199 aaPredicted RBP9.42□□□□□ -0.9
USP3-206ENST00000558157 SLC7A11Q9UPY5 501 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 COA3Q9Y2R0 106 aaPredicted RBP9.42□□□□□ -0.9
USP3-206ENST00000558157 C11orf98E9PRG8 122 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 DXOO77932 396 aaKnown RBP9.42□□□□□ -0.9
USP3-206ENST00000558157 IFNA1P01562 189 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 HPNP05981 417 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 ZNF728P0DKX0 622 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 SRP14P37108 136 aaKnown RBP9.42□□□□□ -0.9
USP3-206ENST00000558157 GALR1P47211 349 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 ZNF41P51814 821 aaPredicted RBP9.42□□□□□ -0.9
USP3-206ENST00000558157 TAS2R30P59541 319 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 LCN2P80188 198 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 FAM69BQ5VUD6 431 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 MRPL14Q6P1L8 145 aaKnown RBP9.42□□□□□ -0.9
USP3-206ENST00000558157 OR5AS1Q8N127 324 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 OR52M1Q8NGK5 317 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 MSI2Q96DH6 328 aaKnown RBP9.42□□□□□ -0.9
USP3-206ENST00000558157 SLC46A1Q96NT5 459 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 OR10A5Q9H207 317 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 BANF2Q9H503 90 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 OR6C3Q9NZP0 311 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 GNG13Q9P2W3 67 aa9.42□□□□□ -0.9
USP3-206ENST00000558157 PTRH2Q9Y3E5 179 aaKnown RBP9.42□□□□□ -0.9
USP3-206ENST00000558157 ZFHX2Q9C0A1 2572 aaPredicted RBP9.42□□□□□ -0.9
USP3-206ENST00000558157 IGHV3-20A0A0C4DH32 117 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 H7BYZ3 331 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 SCDO00767 359 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 DKK1O94907 266 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 DDAH2O95865 285 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 OR3A4PP47883 348 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 ZNF133P52736 654 aaPredicted RBP9.41□□□□□ -0.9
USP3-206ENST00000558157 GABREP78334 506 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 ANKRD37Q7Z713 158 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 OR1N1Q8NGS0 311 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 C16orf52Q8NHV5 167 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 MRGPRDQ8TDS7 321 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 SSC4DQ8WTU2 575 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 MBD3L1Q8WWY6 194 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 MS4A10Q96PG2 267 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 ZPBPQ9BS86 351 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 RBKSQ9H477 322 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 DMXL1Q9Y485 3027 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 IGSF23A1L1A6 192 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 C9orf172C9J069 976 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 BLVRBP30043 206 aaPredicted RBP9.41□□□□□ -0.9
USP3-206ENST00000558157 RAB7AP51149 207 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 UCP3P55916 312 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 SLC37A1P57057 533 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 DCAF7P61962 342 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 ZNF92Q03936 586 aa9.41□□□□□ -0.9
USP3-206ENST00000558157 NNATQ16517 81 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms