RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 TMEM161BQ8NDZ6 487 aa2.62□□□□□ -1.99
TDP1-217ENST00000557782 OR5H2Q8NGV7 314 aa2.62□□□□□ -1.99
TDP1-217ENST00000557782 OR1P1Q8NH06 330 aa2.62□□□□□ -1.99
TDP1-217ENST00000557782 TNFAIP8L1Q8WVP5 186 aa2.62□□□□□ -1.99
TDP1-217ENST00000557782 AP3S1Q92572 193 aa2.62□□□□□ -1.99
TDP1-217ENST00000557782 CLDN23Q96B33 292 aa2.62□□□□□ -1.99
TDP1-217ENST00000557782 FXYD5Q96DB9 178 aa2.62□□□□□ -1.99
TDP1-217ENST00000557782 PDXPQ96GD0 296 aa2.62□□□□□ -1.99
TDP1-217ENST00000557782 ZNF414Q96IQ9 312 aa2.62□□□□□ -1.99
TDP1-217ENST00000557782 ZIM3Q96PE6 472 aa2.62□□□□□ -1.99
TDP1-217ENST00000557782 PECRQ9BY49 303 aa2.62□□□□□ -1.99
TDP1-217ENST00000557782 ULBP1Q9BZM6 244 aa2.62□□□□□ -1.99
TDP1-217ENST00000557782 OR51I1Q9H343 314 aa2.62□□□□□ -1.99
TDP1-217ENST00000557782 C12orf10Q9HB07 376 aa2.62□□□□□ -1.99
TDP1-217ENST00000557782 XPNPEP1Q9NQW7 623 aa2.62□□□□□ -1.99
TDP1-217ENST00000557782 COL5A2P05997 1499 aaPredicted RBP2.62□□□□□ -1.99
TDP1-217ENST00000557782 VGLL3A8MV65 326 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 TRIM49D1C9J1S8 452 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 H0YJW9 148 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 RGS5O15539 181 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 KCNK2O95069 426 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 OR4A8P0C604 315 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 TLX1NBP0CAT3 122 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 DDTP30046 118 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 KIR3DL2P43630 455 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 LHX2P50458 406 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 MNAT1P51948 309 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 MP68P56378 58 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 RAB2AP61019 212 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 NAA20P61599 178 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 ESRRGP62508 458 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 HPCAP84074 193 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 ATP5G2Q06055 141 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 EBPQ15125 230 aaKnown RBP2.61□□□□□ -1.99
TDP1-217ENST00000557782 RSU1Q15404 277 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 BATFQ16520 125 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 MAPK14Q16539 360 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 LINC00303Q3SY05 128 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 TEX30Q5JUR7 227 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 HENMT1Q5T8I9 393 aaKnown RBP2.61□□□□□ -1.99
TDP1-217ENST00000557782 FAM222AQ5U5X8 452 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 SPATA31B1PQ5VZV4 182 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 OR10K2Q6IF99 312 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 ORMDL3Q8N138 153 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 LRRC25Q8N386 305 aaPredicted RBP2.61□□□□□ -1.99
TDP1-217ENST00000557782 NATD1Q8N6N6 113 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 OR5W2Q8NH69 310 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 OLFM3Q96PB7 478 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 RTBDNQ9BSG5 229 aaPredicted RBP2.61□□□□□ -1.99
TDP1-217ENST00000557782 CHCHD7Q9BUK0 85 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 ZNF717Q9BY31 904 aaPredicted RBP2.61□□□□□ -1.99
TDP1-217ENST00000557782 ZNF436Q9C0F3 470 aaPredicted RBP2.61□□□□□ -1.99
TDP1-217ENST00000557782 EIF5A2Q9GZV4 153 aaKnown RBP2.61□□□□□ -1.99
TDP1-217ENST00000557782 TLNRD1Q9H1K6 362 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 ZSCAN16Q9H4T2 348 aaPredicted RBP2.61□□□□□ -1.99
TDP1-217ENST00000557782 C8orf17Q9NRJ1 99 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 PLSCR3Q9NRY6 295 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 SLC7A10Q9NS82 523 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 GLTPQ9NZD2 209 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 TAC3Q9UHF0 121 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 ENOPH1Q9UHY7 261 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 ZNF223Q9UK11 482 aaPredicted RBP2.61□□□□□ -1.99
TDP1-217ENST00000557782 FBXO5Q9UKT4 447 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 RAB26Q9ULW5 256 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 NEU3Q9UQ49 428 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 BTRCQ9Y297 605 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 MMACHCQ9Y4U1 282 aa2.61□□□□□ -1.99
TDP1-217ENST00000557782 BAZ2AQ9UIF9 1905 aaKnown RBP2.61□□□□□ -1.99
TDP1-217ENST00000557782 PTPRKQ15262 1439 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 ARHGAP21Q5T5U3 1957 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 IGHV3-49A0A0A0MS15 119 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 IGKV6-21A0A0C4DH24 114 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 WI2-2373I1.2A0A1W2PRP0 233 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 TMEM223A0PJW6 202 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 C5orf63A6NC05 138 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 SMIM9A6NGZ8 99 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 BTNL10A8MVZ5 291 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 A8MWL6 223 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 PGRMC1O00264 195 aaKnown RBP2.6□□□□□ -1.99
TDP1-217ENST00000557782 LY6G6DO95868 133 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 CRYBA1P05813 215 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 FABP1P07148 127 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 OR4E1P0C645 316 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 HOXB6P17509 224 aaKnown RBP2.6□□□□□ -1.99
TDP1-217ENST00000557782 NELFEP18615 380 aaKnown RBP2.6□□□□□ -1.99
TDP1-217ENST00000557782 CXCL3P19876 107 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 KLK2P20151 261 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 G0S2P27469 103 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 NUDT2P50583 147 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 ZNF83P51522 516 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 CCR6P51684 374 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 SPCS3P61009 180 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 POLR2GP62487 172 aaKnown RBP eCLIP2.6□□□□□ -1.99
TDP1-217ENST00000557782 LOXL1Q08397 574 aaPredicted RBP2.6□□□□□ -1.99
TDP1-217ENST00000557782 PSG7Q13046 419 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 PTGES3Q15185 160 aaKnown RBP2.6□□□□□ -1.99
TDP1-217ENST00000557782 LPAL2Q16609 132 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 UBE2SQ16763 222 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 RNASE13Q5GAN3 156 aaKnown RBP2.6□□□□□ -1.99
TDP1-217ENST00000557782 HACD4Q5VWC8 232 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms