RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 OR4M2Q8NGB6 313 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 OR4K15Q8NH41 348 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 C6orf62Q9GZU0 229 aaPredicted RBP12.58□□□□□ -0.4
NEDD1-213ENST00000557644 ANK3Q12955 4377 aaKnown RBP12.58□□□□□ -0.4
NEDD1-213ENST00000557644 H3BUI4 141 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 MFNGO00587 321 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 RGS5O15539 181 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 AVPP01185 164 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 MT-ND4P03905 459 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 GLAP06280 429 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 LIPFP07098 398 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 HIST1H1DP16402 221 aaKnown RBP12.57□□□□□ -0.4
NEDD1-213ENST00000557644 PAX5Q02548 391 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 PRB3Q04118 309 aaPredicted RBP12.57□□□□□ -0.4
NEDD1-213ENST00000557644 DYNC1I2Q13409 638 aaKnown RBP12.57□□□□□ -0.4
NEDD1-213ENST00000557644 TRAPPC6BQ86SZ2 158 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 LAX1Q8IWV1 398 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 OR13A1Q8NGR1 328 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 TMPRSS13Q9BYE2 586 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 MIXL1Q9H2W2 232 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 YAE1D1Q9NRH1 226 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 hADV38S2A0JD32 116 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 TMEM30CPA0ZSE6 113 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 PAX8Q06710 450 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 CDNFQ49AH0 187 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 SLC35E4Q6ICL7 350 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 Q6ZPA2 131 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 MCFD2Q8NI22 146 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 MRGPRDQ8TDS7 321 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 PHF21AQ96BD5 680 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 S100A16Q96FQ6 103 aaKnown RBP12.57□□□□□ -0.4
NEDD1-213ENST00000557644 C7orf69Q9H7B7 122 aa12.57□□□□□ -0.4
NEDD1-213ENST00000557644 DSCAML1Q8TD84 2053 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 TRAV18A0A075B6X5 111 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 FUOMA2VDF0 154 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 APOA1P02647 267 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 PTHLHP12272 177 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 GLP1RP43220 463 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 MEF2CQ06413 473 aaPredicted RBP12.56□□□□□ -0.4
NEDD1-213ENST00000557644 C1orf229Q6ZS94 237 aaPredicted RBP12.56□□□□□ -0.4
NEDD1-213ENST00000557644 Q8N7P7 452 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 KCNS2Q9ULS6 477 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 LINC00312Q9Y6C7 94 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 HIVEP2P31629 2446 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 TMEM235A6NFC5 223 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 RCC1P18754 421 aaPredicted RBP12.56□□□□□ -0.4
NEDD1-213ENST00000557644 ZNF260Q3ZCT1 412 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 C5orf24Q7Z6I8 188 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 GAPTQ8N292 157 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 C11orf42Q8N5U0 333 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 MRPL30Q8TCC3 161 aaKnown RBP12.56□□□□□ -0.4
NEDD1-213ENST00000557644 NXF2Q9GZY0 626 aaKnown RBP12.56□□□□□ -0.4
NEDD1-213ENST00000557644 BATF3Q9NR55 127 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 OPN4Q9UHM6 478 aa12.56□□□□□ -0.4
NEDD1-213ENST00000557644 ZFHX3Q15911 3703 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 TRGV10A0A0A0MS01 117 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 FAM25AB3EWG3 89 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 FAM25CB3EWG5 89 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 FAM25GB3EWG6 89 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 ZNF728P0DKX0 622 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 GATA3P23771 443 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 DLX6P56179 175 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 CR1LQ2VPA4 569 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 UBALD1Q8TB05 177 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 ZNF714Q96N38 554 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 PCGF1Q9BSM1 259 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 DIABLOQ9NR28 239 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 TRAPPC2LQ9UL33 140 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 A8MV72 311 aaPredicted RBP12.55□□□□□ -0.4
NEDD1-213ENST00000557644 XRCC3O43542 346 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 SCGNO76038 276 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 NAPSAO96009 420 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 MMP9P14780 707 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 OMGP23515 440 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 SSTR5P35346 364 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 TMEM69Q5SWH9 247 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 ZNF565Q8N9K5 539 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 CMTM3Q96MX0 182 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 WDFY2Q96P53 400 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 CMSS1Q9BQ75 279 aaKnown RBP12.55□□□□□ -0.4
NEDD1-213ENST00000557644 SIRPDQ9H106 197 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 SIRT7Q9NRC8 400 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 OR6C3Q9NZP0 311 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 LPAR3Q9UBY5 353 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 AUP1Q9Y679 476 aa12.55□□□□□ -0.4
NEDD1-213ENST00000557644 CA11O75493 328 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 MMP23AO75900 390 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 METTL11BQ5VVY1 283 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 IL17RELQ6ZVW7 336 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 NUDCD2Q8WVJ2 157 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 CORO2AQ92828 525 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 GCDHQ92947 438 aaPredicted RBP12.54□□□□□ -0.4
NEDD1-213ENST00000557644 CHMP1AQ9HD42 196 aaPredicted RBP12.54□□□□□ -0.4
NEDD1-213ENST00000557644 UBE2J1Q9Y385 318 aaPredicted RBP12.54□□□□□ -0.4
NEDD1-213ENST00000557644 A0A0A6YYH2 397 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 A6NJ64 397 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 SERPINE3A8MV23 424 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 TOX4O94842 621 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 CGB3P0DN86 165 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 CGB7P0DN87 165 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms