RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 PLXNA2O75051 1894 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 MYO18BQ8IUG5 2567 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 KIR2DL5BA0A0G2JN68 375 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 KIR2DL5BA0A0G2JPC4 375 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 FAM240BA0A1B0GVZ2 78 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 A0A1W2PPV4 95 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 A0A1W2PPV9 198 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 RBMY1BA6NDE4 496 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 RBMY1EA6NEQ0 496 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 FABP12A6NFH5 140 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 MGAT4DA6NG13 374 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 OR5B21A6NL26 309 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 A8MU10 97 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 C1orf196B1AJZ1 125 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 M0R3G1 203 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 AIPO00170 330 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 BHLHE40O14503 412 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 TP53I11O14683 189 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 RNF13O43567 381 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 WBP4O75554 376 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 ATG12O94817 140 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 IFNA21P01568 189 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 IFNA17P01571 189 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 FTH1P02794 183 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 HPNP05981 417 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 HTR1AP08908 422 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 RBMY1DP0C7P1 496 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 DNAH10OSP0CZ25 163 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 RBMY1A1P0DJD3 496 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 RD3LP0DJH9 198 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 SCGB1A1P11684 91 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 HIST1H1BP16401 226 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 ARR3P36575 388 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 ETV6P41212 452 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 VDAC2P45880 294 aaPredicted RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 GCLMP48507 274 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 TMEM33P57088 247 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 TAS2R39P59534 338 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 DNAJB13P59910 316 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 ERVS71-1P61550 626 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 SNRPFP62306 86 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 RPS24P62847 133 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 IRF8Q02556 426 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 SRSF6Q13247 344 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 EIF3IQ13347 325 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 ARFRP1Q13795 201 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 SPA17Q15506 151 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 NSDHLQ15738 373 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 GUCA2BQ16661 112 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 BSXQ3C1V8 233 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 PAGE3Q5JUK9 113 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 CARD17Q5XLA6 110 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 CLEC18BQ6UXF7 455 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 Q6ZSR6 202 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 SLC35D2Q76EJ3 337 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 SCD5Q86SK9 330 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 PAQR7Q86WK9 346 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 C10orf107Q8IVU9 208 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 KIR2DL5AQ8N109 375 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 STPG2Q8N412 459 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 BPIFB6Q8NFQ5 453 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 OR51A7Q8NH64 312 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 KIR2DL5BQ8NHK3 375 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 WFDC5Q8TCV5 224 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 NDRG1Q92597 394 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 ARPC1AQ92747 370 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 PRRC1Q96M27 445 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 PANX1Q96RD7 426 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 CNN2Q99439 309 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 NIPSNAP1Q9BPW8 284 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 CMSS1Q9BQ75 279 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 VPS25Q9BRG1 176 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 UTP23Q9BRU9 249 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 CHRDL1Q9BU40 450 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 CCDC32Q9BV29 185 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 DDA1Q9BW61 102 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 ZNF436Q9C0F3 470 aaPredicted RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 NXF2Q9GZY0 626 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 DSN1Q9H410 356 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 WDR55Q9H6Y2 383 aaPredicted RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 CSNK1G1Q9HCP0 422 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 MRPL22Q9NWU5 206 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 SMPXQ9UHP9 88 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 GNG8Q9UK08 70 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 SLC7A11Q9UPY5 501 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 PSG11Q9UQ72 335 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 TBL2Q9Y4P3 447 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 NPTNQ9Y639 398 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 MRPS18BQ9Y676 258 aaKnown RBP3.17□□□□□ -1.9
PRPF39-212ENST00000557477 NAV2Q8IVL1 2488 aa3.17□□□□□ -1.9
PRPF39-212ENST00000557477 GOLGA4Q13439 2230 aaKnown RBP3.16□□□□□ -1.9
PRPF39-212ENST00000557477 PCNX2A6NKB5 2137 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 PNMA8CA0A1B0GUJ8 204 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 A0A1B0GW15 77 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 A0A1W2PQL4 384 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-212ENST00000557477 OR2AG2A6NM03 316 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 D6RAR5 112 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 SMLR1H3BR10 107 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 M0R143 59 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 AGPAT2O15120 278 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms