RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 SLC25A21Q9BQT8 299 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-230ENST00000557427 GINS4Q9BRT9 223 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 TM2D1Q9BX74 207 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 MMP26Q9NRE1 261 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 ANAPC10Q9UM13 185 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 FLVCR2Q9UPI3 526 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 NPTNQ9Y639 398 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 MEIKINA0A087WXM9 373 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 A0A1B0GUS0 222 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 FOXI3A8MTJ6 420 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-230ENST00000557427 IQCF6A8MYZ5 107 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 ZNF736B4DX44 427 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-230ENST00000557427 CA11O75493 328 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 CRTAPO75718 401 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-230ENST00000557427 ZNF735P0CB33 412 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 ANXA3P12429 323 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 HIST1H1DP16402 221 aaKnown RBP10.37□□□□□ -0.75
SHMT2-230ENST00000557427 SELEP16581 610 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 ZP1P60852 638 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 MRPS15P82914 257 aaKnown RBP10.37□□□□□ -0.75
SHMT2-230ENST00000557427 ZNF92Q03936 586 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 ZNF626Q68DY1 528 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 ASCL4Q6XD76 172 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 SLC36A1Q7Z2H8 476 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 MRPL21Q7Z2W9 205 aaKnown RBP10.37□□□□□ -0.75
SHMT2-230ENST00000557427 OR4D10Q8NGI6 311 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 OR51S1Q8NGJ8 323 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 FAM110DQ8TAY7 271 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-230ENST00000557427 DACT3Q96B18 629 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-230ENST00000557427 RAB3CQ96E17 227 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 S100A13Q99584 98 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 NICN1Q9BSH3 213 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 SELENOIQ9C0D9 397 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 ALX4Q9H161 411 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-230ENST00000557427 BEX1Q9HBH7 125 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 GCM1Q9NP62 436 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 GPR173Q9NS66 373 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 SLC2A8Q9NY64 477 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 ING4Q9UNL4 249 aa10.37□□□□□ -0.75
SHMT2-230ENST00000557427 COL7A1Q02388 2944 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 ZNF816-ZNF321PA0A0X1KG74 233 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 MDFIC2A0A1B0GVS7 189 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 FAM172BPA6NC97 362 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 FAM181BA6NEQ2 426 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 DISC1C4P0D8 188 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 MFNGO00587 321 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 MLNRO43193 412 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 SSNA1O43805 119 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 SSX5O60225 188 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 CYB5R3P00387 301 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-230ENST00000557427 NRASP01111 189 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 MGMTP16455 207 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 GNB3P16520 340 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 NAT1P18440 290 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 CA6P23280 308 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 CBX5P45973 191 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 RBP2P50120 134 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 MTCP1P56278 107 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 TMEM50BP56557 158 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 GNG2P59768 71 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 CDK10Q15131 360 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 TAF9Q16594 264 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 SLC22A6Q4U2R8 563 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 PLAC9Q5JTB6 97 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 MOGAT3Q86VF5 341 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 SPICQ8N5J4 248 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 BEST4Q8NFU0 473 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 OR8S1Q8NH09 359 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 NPRL2Q8WTW4 380 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 BORCS8Q96FH0 119 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 MEGF10Q96KG7 1140 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 HYLS1Q96M11 299 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 BANF2Q9H503 90 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 OPA3Q9H6K4 179 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 IFT46Q9NQC8 304 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 C1RLQ9NZP8 487 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 SCP2D1Q9UJQ7 156 aa10.36□□□□□ -0.75
SHMT2-230ENST00000557427 ELF5Q9UKW6 265 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-230ENST00000557427 A0A1W2PP11 408 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 CD300LBA8K4G0 201 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 TMEM178BH3BS89 294 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 RGS13O14921 159 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 SOCS1O15524 211 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 CREBL2O60519 120 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-230ENST00000557427 IGHV2-70P01814 119 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 AMY2AP04746 511 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 ANXA7P20073 488 aaKnown RBP10.35□□□□□ -0.75
SHMT2-230ENST00000557427 CPT2P23786 658 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 PMELP40967 661 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 FUT6P51993 359 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 ATP1B3P54709 279 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 IFITM2Q01629 132 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 OR8G1Q15617 311 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 ACTBL2Q562R1 376 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 RNASE10Q5GAN6 216 aaKnown RBP10.35□□□□□ -0.75
SHMT2-230ENST00000557427 PXT1Q8NFP0 134 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 OR51T1Q8NGJ9 327 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 OR5D18Q8NGL1 313 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 ZFAND1Q8TCF1 268 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 NUDCD2Q8WVJ2 157 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms