RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 NIPAL3Q6P499 406 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 TMEM88Q6PEY1 159 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 TMEM144Q7Z5S9 345 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 TMED4Q7Z7H5 227 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 LYG2Q86SG7 212 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 MDP1Q86V88 176 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 LRP11Q86VZ4 500 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 FUNDC1Q8IVP5 155 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 BOD1L2Q8IYS8 172 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 FAM71CQ8NEG0 241 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 DEFB108BQ8NET1 73 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 OR51D1Q8NGF3 324 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 OR5L1Q8NGL2 311 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 OR13C9Q8NGT0 318 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 OR10K1Q8NGX5 313 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 OR10R2Q8NGX6 335 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 GPX8Q8TED1 209 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 PCNPQ8WW12 178 aaKnown RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 LRTOMTQ8WZ04 291 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 C11orf40Q8WZ69 217 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 TAF15Q92804 592 aaKnown RBP eCLIP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 GHSRQ92847 366 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 YIPF6Q96EC8 236 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 DAZAP1Q96EP5 407 aaKnown RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 TMEM19Q96HH6 336 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 FCRL1Q96LA6 429 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 TSSK3Q96PN8 268 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 OR7D2Q96RA2 312 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF607Q96SK3 696 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 TAPBPLQ9BX59 468 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 SNHG12Q9BXW3 62 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 MMP28Q9H239 520 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 SLC25A32Q9H2D1 315 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 SLC38A1Q9H2H9 487 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 PCNX3Q9H6A9 2034 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 PPP1R3EQ9H7J1 279 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 AUNIPQ9H7T9 357 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 HINT3Q9NQE9 182 aaKnown RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 EXOSC3Q9NQT5 275 aaKnown RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 SMCO4Q9NRQ5 59 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 MTCH1Q9NZJ7 389 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 ADA2Q9NZK5 511 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 MRPL15Q9P015 296 aaKnown RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 RHCGQ9UBD6 479 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF230Q9UIE0 474 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF222Q9UK12 451 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 PITPNC1Q9UKF7 332 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 RASD1Q9Y272 281 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 WIPI2Q9Y4P8 454 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 URGCP-MRPS24S4R325 110 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 DSPPQ9NZW4 1301 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 TRAV25A0A0B4J276 109 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 IGHV1-69-2A0A0G2JMI3 117 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 A0A1W2PQ09 198 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 CLPSL1A2RUU4 121 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 C17orf100A8MU93 164 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 TMEM233B4DJY2 109 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 H3BN98 237 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 FAAHO00519 579 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 GOSR2O14653 212 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 PIN1P1O15428 100 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 TRAF3IP2O43734 574 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-247ENST00000557311 OR2T1O43869 369 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 TYROBPO43914 113 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 CA11O75493 328 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 NDUFA7O95182 113 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 MPC2O95563 127 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 NGFP01138 241 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 MT-ND4LP03901 98 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 NMBP08949 121 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 HOXB5P09067 269 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 ALDOCP09972 364 aaKnown RBP4.07□□□□□ -1.76
ATXN3-247ENST00000557311 OR10J4P0C629 311 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 UROSP10746 265 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 LAMP1P11279 417 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 RPA2P15927 270 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 SELEP16581 610 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 RCC1P18754 421 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-247ENST00000557311 SDC1P18827 310 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 GZMHP20718 246 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 CXCR1P25024 350 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 CEACAM3P40198 252 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 INPP1P49441 399 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 PPT1P50897 306 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 CRYBA4P53673 196 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 AQP5P55064 265 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 LSM3P62310 102 aaKnown RBP4.07□□□□□ -1.76
ATXN3-247ENST00000557311 BTG1P62324 171 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 RAB11AP62491 216 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 CCL8P80075 99 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 LCN2P80188 198 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 DLK1P80370 383 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 DHODHQ02127 395 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF154Q13106 437 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 CLINT1Q14677 625 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 OR7A5Q15622 319 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 SRSF7Q16629 238 aaKnown RBP eCLIP4.07□□□□□ -1.76
ATXN3-247ENST00000557311 CYP51A1Q16850 503 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 GSG1Q2KHT4 349 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 COX19Q49B96 90 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms