RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 ARG1P05089 322 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 CGB3P0DN86 165 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 CGB7P0DN87 165 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 VSIG8P0DPA2 414 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 HKR1P10072 659 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 FUT3P21217 361 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 CDK2P24941 298 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 FGF9P31371 208 aaPredicted RBP8.69□□□□□ -1.02
LINC00239-201ENST00000556973 DYNC1I2Q13409 638 aaKnown RBP8.69□□□□□ -1.02
LINC00239-201ENST00000556973 ZNF626Q68DY1 528 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 RAB12Q6IQ22 244 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 BRICD5Q6PL45 260 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 PLPPR1Q8TBJ4 325 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 DYRK2Q92630 601 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 MALSU1Q96EH3 234 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 AJUBAQ96IF1 538 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 Q96M66 194 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 GFI1Q99684 422 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 CLEC7AQ9BXN2 247 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 PLGRKTQ9HBL7 147 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 TNFRSF19Q9NS68 423 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 ZNRD1Q9P1U0 126 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 RCC2Q9P258 522 aaKnown RBP8.69□□□□□ -1.02
LINC00239-201ENST00000556973 PEX16Q9Y5Y5 336 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 IGHV2-26A0A0B4J1V2 119 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 TMEM30CPA0ZSE6 113 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 BTBD17A6NE02 478 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 ODF3BA8MYP8 253 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 NPIPB11E5RHQ5 1161 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 CA11O75493 328 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 MMP23AO75900 390 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 TNFAIP8O95379 198 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 MPIG6BO95866 241 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 IGHV4-59P01825 116 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 MT-ND4P03905 459 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 CRYBA1P05813 215 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 ARSBP15848 533 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 OMGP23515 440 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 MYL9P24844 172 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 CD34P28906 385 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 COMPP49747 757 aaPredicted RBP8.68□□□□□ -1.02
LINC00239-201ENST00000556973 PRRX1P54821 245 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 RPL15P61313 204 aaKnown RBP8.68□□□□□ -1.02
LINC00239-201ENST00000556973 QRFPP83859 136 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 FOXL1Q12952 345 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 AANATQ16613 207 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 C17orf58Q2M2W7 97 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 SYT6Q5T7P8 510 aaPredicted RBP8.68□□□□□ -1.02
LINC00239-201ENST00000556973 MINOS1Q5TGZ0 78 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 PRAMEF5Q5TYX0 476 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 ZNF497Q6ZNH5 498 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 OR2W3Q7Z3T1 314 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 ABHD12Q8N2K0 398 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 OR10A7Q8NGE5 316 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 OR13A1Q8NGR1 328 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 OR5R1Q8NH85 324 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 NEK7Q8TDX7 302 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 C17orf50Q8WW18 174 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 FAM46BQ96A09 425 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 SSX3Q99909 188 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 TM2D1Q9BX74 207 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 CHIAQ9BZP6 476 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 LINC00574Q9H8X3 128 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 STUB1Q9UNE7 303 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 SSR3Q9UNL2 185 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 MINOS1-NBL1R4GNA1 71 aa8.68□□□□□ -1.02
LINC00239-201ENST00000556973 A0A087WXM4 84 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 A0A087X0M5 115 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 A0A1B0GX30 115 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 FAM181BA6NEQ2 426 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 TMEM14DPA8MWL7 114 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 ORC5O43913 435 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 PDCD6O75340 191 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 RAB3BP20337 219 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 GLP1RP43220 463 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 RPS27AP62979 156 aaKnown RBP8.67□□□□□ -1.02
LINC00239-201ENST00000556973 UNC119Q13432 240 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 RAB11BQ15907 218 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 C2orf76Q3KRA6 126 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 KIAA2026Q5HYC2 2103 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 SIGIRRQ6IA17 410 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 C22orf42Q6IC83 251 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 OR10K2Q6IF99 312 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 C12orf54Q6X4T0 127 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 SLC16A12Q6ZSM3 486 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 LHFPL4Q7Z7J7 247 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 GAPTQ8N292 157 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 ZNF596Q8TC21 504 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 MRGPRDQ8TDS7 321 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 CREB3L1Q96BA8 519 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 NEDD4LQ96PU5 975 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 URM1Q9BTM9 101 aaKnown RBP8.67□□□□□ -1.02
LINC00239-201ENST00000556973 TMEM59Q9BXS4 323 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 TXNL4BQ9NX01 149 aaKnown RBP8.67□□□□□ -1.02
LINC00239-201ENST00000556973 ETAA1Q9NY74 926 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 CALYQ9NYX4 217 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 IDI2-AS1Q9NZ38 188 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 FBLN5Q9UBX5 448 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 STEAP1Q9UHE8 339 aa8.67□□□□□ -1.02
LINC00239-201ENST00000556973 TRAPPC2LQ9UL33 140 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms