RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 OR5I1Q13606 314 aa15.02■□□□□ -0
PTPN21-208ENST00000556564 Q6ZT83 130 aa15.02■□□□□ -0
PTPN21-208ENST00000556564 GPX7Q96SL4 187 aaPredicted RBP15.02■□□□□ -0
PTPN21-208ENST00000556564 WNT5BQ9H1J7 359 aa15.02■□□□□ -0
PTPN21-208ENST00000556564 MRPL22Q9NWU5 206 aaKnown RBP15.02■□□□□ -0
PTPN21-208ENST00000556564 NKX2-6A6NCS4 301 aa15.02□□□□□ -0.01
PTPN21-208ENST00000556564 PDLIM4P50479 330 aa15.02□□□□□ -0.01
PTPN21-208ENST00000556564 NFAM1Q8NET5 270 aaPredicted RBP15.02□□□□□ -0.01
PTPN21-208ENST00000556564 SMCO4Q9NRQ5 59 aa15.02□□□□□ -0.01
PTPN21-208ENST00000556564 NINQ8N4C6 2090 aa15.02□□□□□ -0.01
PTPN21-208ENST00000556564 TCF20Q9UGU0 1960 aaKnown RBP15.02□□□□□ -0.01
PTPN21-208ENST00000556564 SYNGR1O43759 233 aa15.02□□□□□ -0.01
PTPN21-208ENST00000556564 C1QBP02746 253 aa15.02□□□□□ -0.01
PTPN21-208ENST00000556564 LYZP61626 148 aa15.02□□□□□ -0.01
PTPN21-208ENST00000556564 MPPED2Q15777 294 aa15.02□□□□□ -0.01
PTPN21-208ENST00000556564 GGNBP1Q5YKI7 109 aa15.02□□□□□ -0.01
PTPN21-208ENST00000556564 PRR27Q6MZM9 219 aa15.02□□□□□ -0.01
PTPN21-208ENST00000556564 Q6ZNX1 250 aa15.02□□□□□ -0.01
PTPN21-208ENST00000556564 FLYWCH2Q96CP2 140 aaKnown RBP15.02□□□□□ -0.01
PTPN21-208ENST00000556564 CLEC5AQ9NY25 188 aa15.02□□□□□ -0.01
PTPN21-208ENST00000556564 HSBP1L1C9JCN9 74 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 RRASP10301 218 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 EFNB2P52799 333 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 OXA1LQ15070 435 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 LSM2Q9Y333 95 aaKnown RBP15.01□□□□□ -0.01
PTPN21-208ENST00000556564 IGHV3OR16-10A0A075B7F0 116 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 EXOSC2Q13868 293 aaKnown RBP15.01□□□□□ -0.01
PTPN21-208ENST00000556564 PXDC1Q5TGL8 231 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 HARBI1Q96MB7 349 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 SIRT4Q9Y6E7 314 aaPredicted RBP15.01□□□□□ -0.01
PTPN21-208ENST00000556564 PIKFYVEQ9Y2I7 2098 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 ZNF705FA8MVS1 300 aaPredicted RBP15.01□□□□□ -0.01
PTPN21-208ENST00000556564 ZNF705DP0CH99 300 aaPredicted RBP15.01□□□□□ -0.01
PTPN21-208ENST00000556564 ZNF705BP0CI00 300 aaPredicted RBP15.01□□□□□ -0.01
PTPN21-208ENST00000556564 SLC38A11Q08AI6 406 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 TEX30Q5JUR7 227 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 SHISA5Q8N114 240 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 MARC2Q969Z3 335 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 PIPOXQ9P0Z9 390 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 HOXB1P14653 301 aaPredicted RBP15.01□□□□□ -0.01
PTPN21-208ENST00000556564 DHRS2Q13268 280 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 TVP23CQ96ET8 276 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 AP1S3Q96PC3 154 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 ABHD1Q96SE0 405 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 RSRP1Q9BUV0 290 aa15.01□□□□□ -0.01
PTPN21-208ENST00000556564 ANKRD20A5PA0PJZ0 165 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 MMDQ15546 238 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 HMGN3Q15651 99 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 AARDQ4LEZ3 155 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 RPS4Y2Q8TD47 263 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 PFDN5Q99471 154 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 RPUSD3Q6P087 351 aaKnown RBP15□□□□□ -0.01
PTPN21-208ENST00000556564 WDR31Q8NA23 367 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 OR52L2PQ8NGH6 319 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 UQCC1Q9NVA1 299 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 SEMA7AO75326 666 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 OR2H2O95918 312 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 FFAR4Q5NUL3 377 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 FNDC7Q5VTL7 733 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 UNQ6494/PRO21346Q6UXR6 183 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 VSTM2AQ8TAG5 236 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 BLNKQ8WV28 456 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 RPUSD4Q96CM3 377 aaKnown RBP15□□□□□ -0.01
PTPN21-208ENST00000556564 PAX6P26367 422 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 LFNGQ8NES3 379 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 OR10A7Q8NGE5 316 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 IGHV3-72A0A0B4J1Y9 119 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 CRHP06850 196 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 ZNF708P17019 499 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 G6PCP35575 357 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 WDYHV1Q96HA8 205 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 WDFY2Q96P53 400 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 SLC25A22Q9H936 323 aa15□□□□□ -0.01
PTPN21-208ENST00000556564 SF3B6Q9Y3B4 125 aaKnown RBP15□□□□□ -0.01
PTPN21-208ENST00000556564 IGHV1-69-2A0A0G2JMI3 117 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 DUS4LO95620 317 aaKnown RBP14.99□□□□□ -0.01
PTPN21-208ENST00000556564 ETV3LQ6ZN32 361 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 C9orf106Q8NAJ2 232 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 AAMDCQ9H7C9 122 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 BIN3Q9NQY0 253 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 FOXD3Q9UJU5 478 aaPredicted RBP14.99□□□□□ -0.01
PTPN21-208ENST00000556564 METTL15P1P0C7V9 234 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 DAOP14920 347 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 ORM2P19652 201 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 TMEM231Q9H6L2 316 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 ZMIZ1Q9ULJ6 1067 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 H0Y8G0 127 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 OR1B1Q8NGR6 318 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 PPYP01298 95 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 AKR1C3P42330 323 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 BSPH1Q075Z2 132 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 TMEM91Q6ZNR0 172 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 IGHMP01871 453 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 FADS6Q8N9I5 356 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 RELL2Q8NC24 303 aaPredicted RBP14.99□□□□□ -0.01
PTPN21-208ENST00000556564 OR4F17Q8NGA8 305 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 GRAMD2BQ96HH9 432 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 RAB18Q9NP72 206 aa14.99□□□□□ -0.01
PTPN21-208ENST00000556564 IGKV3-7A0A075B6H7 116 aa14.98□□□□□ -0.01
PTPN21-208ENST00000556564 IGLV3-12A0A075B6K2 115 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms