RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 PAX5Q02548 391 aa9.05□□□□□ -0.96
LINC01550-206ENST00000556462 HERPUD1Q15011 391 aa9.05□□□□□ -0.96
LINC01550-206ENST00000556462 SLC35E4Q6ICL7 350 aa9.05□□□□□ -0.96
LINC01550-206ENST00000556462 TMEM17Q86X19 198 aa9.05□□□□□ -0.96
LINC01550-206ENST00000556462 ASCC1Q8N9N2 400 aaKnown RBP9.05□□□□□ -0.96
LINC01550-206ENST00000556462 ZBTB8BQ8NAP8 495 aaPredicted RBP9.05□□□□□ -0.96
LINC01550-206ENST00000556462 ZNRF1Q8ND25 227 aa9.05□□□□□ -0.96
LINC01550-206ENST00000556462 DEFB108BQ8NET1 73 aa9.05□□□□□ -0.96
LINC01550-206ENST00000556462 OR6F1Q8NGZ6 308 aa9.05□□□□□ -0.96
LINC01550-206ENST00000556462 CCDC107Q8WV48 283 aa9.05□□□□□ -0.96
LINC01550-206ENST00000556462 ALX4Q9H161 411 aaPredicted RBP9.05□□□□□ -0.96
LINC01550-206ENST00000556462 TMEM106BQ9NUM4 274 aa9.05□□□□□ -0.96
LINC01550-206ENST00000556462 TRAV39A0A0B4J263 110 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 IGKV1-6A0A0C4DH72 117 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 KIR2DS1A0A191URI9 304 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 OR5H14A6NHG9 310 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 H7C1Q1 480 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 FABP7O15540 132 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 RLN1P04808 185 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 VSIG10L2P0DP72 767 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 KIR2DS4P43632 304 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 CD300CQ08708 224 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 KIR2DS1Q14954 304 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 GLDNQ6ZMI3 551 aaPredicted RBP9.04□□□□□ -0.96
LINC01550-206ENST00000556462 ZDHHC22Q8N966 263 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 MARCH1Q8TCQ1 289 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 SDSLQ96GA7 329 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 SNX22Q96L94 193 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 ZNF2Q9BSG1 426 aaPredicted RBP9.04□□□□□ -0.96
LINC01550-206ENST00000556462 TMPRSS13Q9BYE2 586 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 GPR132Q9UNW8 380 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 IGHV1-69-2A0A0G2JMI3 117 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 A0A1B0GW55 424 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 K7N7A8 449 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 PRAF2O60831 178 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 IL5P05113 134 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 DUX4L2P0CJ85 424 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 DUX4L3P0CJ86 424 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 DUX4L4P0CJ87 422 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 DUX4L5P0CJ88 424 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 DUX4L6P0CJ89 424 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 DUX4L7P0CJ90 424 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 GLIPR1P48060 266 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 NPY4RP50391 375 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 DUX4L9Q6RFH8 374 aaPredicted RBP9.04□□□□□ -0.96
LINC01550-206ENST00000556462 ZNF788Q6ZQV5 615 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 PEG10Q86TG7 708 aaKnown RBP9.04□□□□□ -0.96
LINC01550-206ENST00000556462 C1orf87Q8N0U7 546 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 CAPSLQ8WWF8 208 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 MED30Q96HR3 178 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 MYOZ1Q9NP98 299 aaPredicted RBP9.04□□□□□ -0.96
LINC01550-206ENST00000556462 DUX4Q9UBX2 424 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 KIF25Q9UIL4 384 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 TRAPPC2LQ9UL33 140 aa9.04□□□□□ -0.96
LINC01550-206ENST00000556462 PPIAL4EA0A075B759 164 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 TMEM30CPA0ZSE6 113 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 HMX3A6NHT5 357 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 PPIAL4DF5H284 164 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 LGALS8O00214 317 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 TNFRSF13BO14836 293 aaPredicted RBP9.03□□□□□ -0.96
LINC01550-206ENST00000556462 GYPAP02724 150 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 TK1P04183 234 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 PPIAL4FP0DN26 164 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 SELLP14151 372 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 COL8A2P25067 703 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 KRBOX4Q5JUW0 171 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 ZNF561Q8N587 486 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 TPRX1Q8N7U7 411 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 GAFA1Q96PS6 74 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 SEC22CQ9BRL7 303 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 TRAF4Q9BUZ4 470 aaPredicted RBP9.03□□□□□ -0.96
LINC01550-206ENST00000556462 C5orf66Q9H5L9 145 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 FBXO9Q9UK97 447 aaPredicted RBP9.03□□□□□ -0.96
LINC01550-206ENST00000556462 LAMP3Q9UQV4 416 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 PPIAL4AQ9Y536 164 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 KIAA2026Q5HYC2 2103 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 TRAV38-1A0A0B4J264 116 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 LYNX1G3V0Z9 82 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 MGST3O14880 152 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 HNRNPCP07910 306 aaKnown RBP eCLIP9.03□□□□□ -0.96
LINC01550-206ENST00000556462 LYNX1P0DP58 116 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 FCGR2CP31995 323 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 SEC61A1P61619 476 aaKnown RBP9.03□□□□□ -0.96
LINC01550-206ENST00000556462 HLA-DRB3P79483 266 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 CBX3Q13185 183 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 METTL11BQ5VVY1 283 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 MOB1BQ7L9L4 216 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 TMED4Q7Z7H5 227 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 SLC25A42Q86VD7 318 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 OR4A4PQ8NGN8 299 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 CCL13Q99616 98 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 SPOCK3Q9BQ16 436 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 RTBDNQ9BSG5 229 aaPredicted RBP9.03□□□□□ -0.96
LINC01550-206ENST00000556462 OR51J1Q9H342 316 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 ITGB1BP2Q9UKP3 347 aa9.03□□□□□ -0.96
LINC01550-206ENST00000556462 LRRK2Q5S007 2527 aa9.02□□□□□ -0.97
LINC01550-206ENST00000556462 MEIKINA0A087WXM9 373 aa9.02□□□□□ -0.97
LINC01550-206ENST00000556462 BET1O15155 118 aa9.02□□□□□ -0.97
LINC01550-206ENST00000556462 SIGLEC5O15389 551 aa9.02□□□□□ -0.97
LINC01550-206ENST00000556462 CTXN2P0C2S0 81 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms