RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 LAMTOR5O43504 91 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 SYT7O43581 403 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 ZFAND5O76080 213 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 ITGA5P08648 1049 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 COX6A1P12074 109 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 KLK2P20151 261 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 CFPP27918 469 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 HTR2CP28335 458 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 ADAM8P78325 824 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 POU3F1Q03052 451 aaPredicted RBP4.43□□□□□ -1.7
TMEM260-210ENST00000556422 HSPB2Q16082 182 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 IQCJQ1A5X6 159 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 CEACAM21Q3KPI0 293 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 TMEM255AQ5JRV8 349 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 SLC23A3Q6PIS1 610 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 HIST2H3AQ71DI3 136 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 ZNF433Q8N7K0 673 aaPredicted RBP4.43□□□□□ -1.7
TMEM260-210ENST00000556422 OR2M3Q8NG83 312 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 MARCH1Q8TCQ1 289 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 RNF128Q8TEB7 428 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 SMIM4Q8WVI0 70 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 IMMP1LQ96LU5 166 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 ABHD6Q9BV23 337 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 PECRQ9BY49 303 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 CALHM2Q9HA72 323 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 ELOVL3Q9HB03 270 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 DOK5Q9P104 306 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 KLHL13Q9P2N7 655 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 LRP12Q9Y561 859 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 HS3ST3B1Q9Y662 390 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 TMEM14AQ9Y6G1 99 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 A0A0D9SG52 128 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 ANKRD30BLA7E2S9 258 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 ZNF850A8MQ14 1090 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 GSTZ1O43708 216 aaPredicted RBP4.43□□□□□ -1.7
TMEM260-210ENST00000556422 ALDOBP05062 364 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 PTHLHP12272 177 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 RCC1P18754 421 aaPredicted RBP4.43□□□□□ -1.7
TMEM260-210ENST00000556422 PTH2RP49190 550 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 MYBPHQ13203 477 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 KLF9Q13886 244 aaPredicted RBP4.43□□□□□ -1.7
TMEM260-210ENST00000556422 TMEM128Q5BJH2 165 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 RNASE12Q5GAN4 147 aaKnown RBP4.43□□□□□ -1.7
TMEM260-210ENST00000556422 CENPVQ7Z7K6 275 aaPredicted RBP4.43□□□□□ -1.7
TMEM260-210ENST00000556422 NIT1Q86X76 327 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 MRAP2Q96G30 205 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 ADGRG7Q96K78 797 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 MCRIP2Q9BUT9 160 aaKnown RBP4.43□□□□□ -1.7
TMEM260-210ENST00000556422 PROK2Q9HC23 129 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 NECAP2Q9NVZ3 263 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 AMDHD2Q9Y303 409 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 MEMO1Q9Y316 297 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 BOD1L1Q8NFC6 3051 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 LOC101059948A0A1B0GTJ6 334 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 COLCA2A8K830 154 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 RAMP1O60894 148 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 LRP3O75074 770 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 HLA-DQA2P01906 255 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 DBHP09172 617 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 GIPP09681 153 aaPredicted RBP4.43□□□□□ -1.7
TMEM260-210ENST00000556422 FPR2P25090 351 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 SRSF1Q07955 248 aaKnown RBP eCLIP4.43□□□□□ -1.7
TMEM260-210ENST00000556422 C3orf36Q3SXR2 165 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 KHDC3LQ587J8 217 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 TOMM20LQ6UXN7 152 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 C12orf54Q6X4T0 127 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 LINC01551Q86U37 167 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 SIAH3Q8IW03 269 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 DND1Q8IYX4 353 aaKnown RBP4.43□□□□□ -1.7
TMEM260-210ENST00000556422 TMEM105Q8N8V8 129 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 OR1L4Q8NGR5 311 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 OR52N5Q8NH56 324 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 ZFP3Q96NJ6 502 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 P2RX4Q99571 388 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 NKX3-1Q99801 234 aaPredicted RBP4.43□□□□□ -1.7
TMEM260-210ENST00000556422 EMC6Q9BV81 110 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 CNTNAP3Q9BZ76 1288 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 HHLA2Q9UM44 414 aa4.43□□□□□ -1.7
TMEM260-210ENST00000556422 LSM5Q9Y4Y9 91 aaKnown RBP4.43□□□□□ -1.7
TMEM260-210ENST00000556422 F5H768 121 aa4.42□□□□□ -1.7
TMEM260-210ENST00000556422 OR6A2O95222 327 aa4.42□□□□□ -1.7
TMEM260-210ENST00000556422 F12P00748 615 aaPredicted RBP4.42□□□□□ -1.7
TMEM260-210ENST00000556422 TK1P04183 234 aa4.42□□□□□ -1.7
TMEM260-210ENST00000556422 MAS1P04201 325 aa4.42□□□□□ -1.7
TMEM260-210ENST00000556422 IL6RP08887 468 aaPredicted RBP4.42□□□□□ -1.7
TMEM260-210ENST00000556422 BMP5P22003 454 aa4.42□□□□□ -1.7
TMEM260-210ENST00000556422 USF1P22415 310 aaPredicted RBP4.42□□□□□ -1.7
TMEM260-210ENST00000556422 CCKBRP32239 447 aa4.42□□□□□ -1.7
TMEM260-210ENST00000556422 RANP62826 216 aaKnown RBP4.42□□□□□ -1.7
TMEM260-210ENST00000556422 SUMO1P63165 101 aaKnown RBP4.42□□□□□ -1.7
TMEM260-210ENST00000556422 PAX5Q02548 391 aa4.42□□□□□ -1.7
TMEM260-210ENST00000556422 GAGE5Q13069 117 aa4.42□□□□□ -1.7
TMEM260-210ENST00000556422 GAGE6Q13070 117 aa4.42□□□□□ -1.7
TMEM260-210ENST00000556422 FAM166AQ6J272 317 aa4.42□□□□□ -1.7
TMEM260-210ENST00000556422 SLC18B1Q6NT16 456 aa4.42□□□□□ -1.7
TMEM260-210ENST00000556422 DNM1P46Q6ZS02 220 aa4.42□□□□□ -1.7
TMEM260-210ENST00000556422 TMEM251Q8N6I4 163 aa4.42□□□□□ -1.7
TMEM260-210ENST00000556422 ZNF676Q8N7Q3 588 aa4.42□□□□□ -1.7
TMEM260-210ENST00000556422 OR4S1Q8NGB4 309 aa4.42□□□□□ -1.7
TMEM260-210ENST00000556422 OR10S1Q8NGN2 331 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms