RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 LURAP1LQ8IV03 231 aa11.63□□□□□ -0.55
SNX6-206ENST00000556162 OR5H6Q8NGV6 325 aa11.63□□□□□ -0.55
SNX6-206ENST00000556162 CORO2AQ92828 525 aa11.63□□□□□ -0.55
SNX6-206ENST00000556162 UPRTQ96BW1 309 aa11.63□□□□□ -0.55
SNX6-206ENST00000556162 ZNF714Q96N38 554 aa11.63□□□□□ -0.55
SNX6-206ENST00000556162 METTL8Q9H825 291 aaKnown RBP11.63□□□□□ -0.55
SNX6-206ENST00000556162 HSF4Q9ULV5 492 aa11.63□□□□□ -0.55
SNX6-206ENST00000556162 FOXI3A8MTJ6 420 aaPredicted RBP11.63□□□□□ -0.55
SNX6-206ENST00000556162 CHRFAM7AQ494W8 412 aa11.63□□□□□ -0.55
SNX6-206ENST00000556162 ZNF497Q6ZNH5 498 aa11.63□□□□□ -0.55
SNX6-206ENST00000556162 IL17RELQ6ZVW7 336 aa11.63□□□□□ -0.55
SNX6-206ENST00000556162 VMO1Q7Z5L0 202 aa11.63□□□□□ -0.55
SNX6-206ENST00000556162 Q8N7P7 452 aa11.63□□□□□ -0.55
SNX6-206ENST00000556162 OR10R2Q8NGX6 335 aa11.63□□□□□ -0.55
SNX6-206ENST00000556162 RAB3CQ96E17 227 aa11.63□□□□□ -0.55
SNX6-206ENST00000556162 ARHGAP5-AS1Q96IT6 56 aa11.63□□□□□ -0.55
SNX6-206ENST00000556162 SULT4A1Q9BR01 284 aa11.63□□□□□ -0.55
SNX6-206ENST00000556162 RHBDL2Q9NX52 303 aa11.63□□□□□ -0.55
SNX6-206ENST00000556162 H3BMQ9 156 aa11.62□□□□□ -0.55
SNX6-206ENST00000556162 RAB27BO00194 218 aa11.62□□□□□ -0.55
SNX6-206ENST00000556162 SCGNO76038 276 aa11.62□□□□□ -0.55
SNX6-206ENST00000556162 MT-ND4P03905 459 aa11.62□□□□□ -0.55
SNX6-206ENST00000556162 PRTN3P24158 256 aa11.62□□□□□ -0.55
SNX6-206ENST00000556162 SOX6P35712 828 aa11.62□□□□□ -0.55
SNX6-206ENST00000556162 MOGAT2Q3SYC2 334 aa11.62□□□□□ -0.55
SNX6-206ENST00000556162 TCF23Q7RTU1 214 aa11.62□□□□□ -0.55
SNX6-206ENST00000556162 ACOT12Q8WYK0 555 aa11.62□□□□□ -0.55
SNX6-206ENST00000556162 AP3S1Q92572 193 aa11.62□□□□□ -0.55
SNX6-206ENST00000556162 PHF21AQ96BD5 680 aa11.62□□□□□ -0.55
SNX6-206ENST00000556162 TBX15Q96SF7 602 aa11.62□□□□□ -0.55
SNX6-206ENST00000556162 GAL3ST2Q9H3Q3 398 aa11.62□□□□□ -0.55
SNX6-206ENST00000556162 SIRT7Q9NRC8 400 aa11.62□□□□□ -0.55
SNX6-206ENST00000556162 TAS2R3Q9NYW6 316 aa11.62□□□□□ -0.55
SNX6-206ENST00000556162 C17orf98A8MV24 154 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 ZNF182P17025 639 aaPredicted RBP11.61□□□□□ -0.55
SNX6-206ENST00000556162 GZMHP20718 246 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 GLP1RP43220 463 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 DLX6P56179 175 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 C11orf42Q8N5U0 333 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 CCDC107Q8WV48 283 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 PECRQ9BY49 303 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 TRAPPC2LQ9UL33 140 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 NIPBLQ6KC79 2804 aaeCLIP11.61□□□□□ -0.55
SNX6-206ENST00000556162 ZNF729A6NN14 1252 aaPredicted RBP11.61□□□□□ -0.55
SNX6-206ENST00000556162 CRLF1O75462 422 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 RBP4P02753 201 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 DYNC1I2Q13409 638 aaKnown RBP11.61□□□□□ -0.55
SNX6-206ENST00000556162 ARL6IP1Q15041 203 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 PLAC9Q5JTB6 97 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 GPR157Q5UAW9 335 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 GAPTQ8N292 157 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 SAMD12Q8N8I0 201 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 OR13A1Q8NGR1 328 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 MRGPRDQ8TDS7 321 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 DYRK2Q92630 601 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 LHX4Q969G2 390 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 UNKLQ9H9P5 680 aaKnown RBP11.61□□□□□ -0.55
SNX6-206ENST00000556162 COMMD3Q9UBI1 195 aa11.61□□□□□ -0.55
SNX6-206ENST00000556162 RSL24D1Q9UHA3 163 aaKnown RBP11.61□□□□□ -0.55
SNX6-206ENST00000556162 A0A075B6Q4 140 aa11.6□□□□□ -0.55
SNX6-206ENST00000556162 TRAV39A0A0B4J263 110 aa11.6□□□□□ -0.55
SNX6-206ENST00000556162 KBTBD11-OT1A0A1B0GTJ5 212 aa11.6□□□□□ -0.55
SNX6-206ENST00000556162 SMIM31A0A1B0GVY4 71 aa11.6□□□□□ -0.55
SNX6-206ENST00000556162 SRD5A1P18405 259 aa11.6□□□□□ -0.55
SNX6-206ENST00000556162 ERVFRD-1P60508 538 aa11.6□□□□□ -0.55
SNX6-206ENST00000556162 KLF17Q5JT82 389 aaPredicted RBP11.6□□□□□ -0.55
SNX6-206ENST00000556162 NCR3LG1Q68D85 454 aa11.6□□□□□ -0.55
SNX6-206ENST00000556162 MZT2AQ6P582 158 aa11.6□□□□□ -0.55
SNX6-206ENST00000556162 OR4K15Q8NH41 348 aa11.6□□□□□ -0.55
SNX6-206ENST00000556162 SLC25A38Q96DW6 304 aa11.6□□□□□ -0.55
SNX6-206ENST00000556162 S100A16Q96FQ6 103 aaKnown RBP11.6□□□□□ -0.55
SNX6-206ENST00000556162 CYYR1Q96J86 154 aa11.6□□□□□ -0.55
SNX6-206ENST00000556162 RBM38Q9H0Z9 239 aaKnown RBP11.6□□□□□ -0.55
SNX6-206ENST00000556162 RIMS4Q9H426 269 aaPredicted RBP11.6□□□□□ -0.55
SNX6-206ENST00000556162 HEXA-AS1Q9H8Q6 139 aa11.6□□□□□ -0.55
SNX6-206ENST00000556162 CHMP1AQ9HD42 196 aaPredicted RBP11.6□□□□□ -0.55
SNX6-206ENST00000556162 DIABLOQ9NR28 239 aa11.6□□□□□ -0.55
SNX6-206ENST00000556162 NDUFA13Q9P0J0 144 aa11.6□□□□□ -0.55
SNX6-206ENST00000556162 AK3Q9UIJ7 227 aa11.6□□□□□ -0.55
SNX6-206ENST00000556162 FN1P02751 2386 aaKnown RBP11.6□□□□□ -0.55
SNX6-206ENST00000556162 TRAV40A0A0B4J280 105 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 CENPVL3A0A0U1RRI6 287 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 ZNF701M0R085 212 aaPredicted RBP11.59□□□□□ -0.55
SNX6-206ENST00000556162 IGHV1-8P0DP01 117 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 HIST1H1DP16402 221 aaKnown RBP11.59□□□□□ -0.55
SNX6-206ENST00000556162 GNB3P16520 340 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 MRPS15P82914 257 aaKnown RBP11.59□□□□□ -0.55
SNX6-206ENST00000556162 UBE2NLQ5JXB2 153 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 RTN4RL2Q86UN3 420 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 DYNC2LI1Q8TCX1 351 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 ABCG5Q9H222 651 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 ZMAT3Q9HA38 289 aaKnown RBP11.59□□□□□ -0.55
SNX6-206ENST00000556162 CALYQ9NYX4 217 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 NUP50Q9UKX7 468 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 ZFHX3Q15911 3703 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 KIAA2026Q5HYC2 2103 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 IGHV3OR16-10A0A075B7F0 116 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 A0A0A6YYH2 397 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 A6NJ64 397 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 SERPINE3A8MV23 424 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms