RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 C1orf123Q9NWV4 160 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 FASNP49327 2511 aaKnown RBP12.41□□□□□ -0.42
VPS33B-205ENST00000556096 IFNL4K9M1U5 179 aa12.4□□□□□ -0.42
VPS33B-205ENST00000556096 WNT9BO14905 357 aa12.4□□□□□ -0.42
VPS33B-205ENST00000556096 DIRAS3O95661 229 aa12.4□□□□□ -0.42
VPS33B-205ENST00000556096 PPYP01298 95 aa12.4□□□□□ -0.42
VPS33B-205ENST00000556096 AADACP22760 399 aa12.4□□□□□ -0.42
VPS33B-205ENST00000556096 ASCL1P50553 236 aa12.4□□□□□ -0.42
VPS33B-205ENST00000556096 SLC9A3R2Q15599 337 aa12.4□□□□□ -0.42
VPS33B-205ENST00000556096 TOMM40LQ969M1 308 aa12.4□□□□□ -0.42
VPS33B-205ENST00000556096 ELMOD3Q96FG2 381 aa12.4□□□□□ -0.42
VPS33B-205ENST00000556096 RSRP1Q9BUV0 290 aa12.4□□□□□ -0.42
VPS33B-205ENST00000556096 MRPL37Q9BZE1 423 aaKnown RBP12.4□□□□□ -0.42
VPS33B-205ENST00000556096 TAAR3PQ9P1P4 343 aa12.4□□□□□ -0.42
VPS33B-205ENST00000556096 PCDHB10Q9UN67 800 aa12.4□□□□□ -0.42
VPS33B-205ENST00000556096 RFPL4AA6NLU0 287 aa12.4□□□□□ -0.43
VPS33B-205ENST00000556096 RFPL4AL1F8VTS6 287 aa12.4□□□□□ -0.43
VPS33B-205ENST00000556096 TUSC2O75896 110 aa12.4□□□□□ -0.43
VPS33B-205ENST00000556096 IFNA2P01563 188 aa12.4□□□□□ -0.43
VPS33B-205ENST00000556096 NFYAP23511 347 aaPredicted RBP12.4□□□□□ -0.43
VPS33B-205ENST00000556096 HLA-DRB3P79483 266 aa12.4□□□□□ -0.43
VPS33B-205ENST00000556096 HERPUD1Q15011 391 aa12.4□□□□□ -0.43
VPS33B-205ENST00000556096 SMIM21Q3B7S5 101 aa12.4□□□□□ -0.43
VPS33B-205ENST00000556096 ANKRD55Q3KP44 614 aa12.4□□□□□ -0.43
VPS33B-205ENST00000556096 FAM90A1Q86YD7 464 aa12.4□□□□□ -0.43
VPS33B-205ENST00000556096 PLPPR1Q8TBJ4 325 aa12.4□□□□□ -0.43
VPS33B-205ENST00000556096 MEGF10Q96KG7 1140 aa12.4□□□□□ -0.43
VPS33B-205ENST00000556096 CABLES2Q9BTV7 478 aa12.4□□□□□ -0.43
VPS33B-205ENST00000556096 PDCD10Q9BUL8 212 aa12.4□□□□□ -0.43
VPS33B-205ENST00000556096 NGBQ9NPG2 151 aa12.4□□□□□ -0.43
VPS33B-205ENST00000556096 WIPI2Q9Y4P8 454 aa12.4□□□□□ -0.43
VPS33B-205ENST00000556096 IGKV1-6A0A0C4DH72 117 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 TEX13DA0A0J9YY54 714 aaPredicted RBP12.39□□□□□ -0.43
VPS33B-205ENST00000556096 hCG_1807616A0A1W2PRN6 198 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 SRRM5B3KS81 715 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 CCSO14618 274 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 ZNF205O95201 554 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 C4BPBP20851 252 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 GATA4P43694 442 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 KCNJ3P48549 501 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 PIGPP57054 158 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 FXYD4P59646 89 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 CYCSP99999 105 aaKnown RBP12.39□□□□□ -0.43
VPS33B-205ENST00000556096 FBXL19-AS1Q494R0 122 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 ABCA11PQ4W5N1 156 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 GSG1LQ6UXU4 331 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 OR5T2Q8NGG2 359 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 LRRC29Q8WV35 223 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 GALNT14Q96FL9 552 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 WFIKKN1Q96NZ8 548 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 OR2V2Q96R30 315 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 MBNL3Q9NUK0 354 aaKnown RBP12.39□□□□□ -0.43
VPS33B-205ENST00000556096 OR14J1Q9UGF5 321 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 ZDHHC8Q9ULC8 765 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 KCNIP3Q9Y2W7 256 aa12.39□□□□□ -0.43
VPS33B-205ENST00000556096 NPIPB11E5RHQ5 1161 aa12.38□□□□□ -0.43
VPS33B-205ENST00000556096 J3QKU1 62 aa12.38□□□□□ -0.43
VPS33B-205ENST00000556096 ABCD4O14678 606 aa12.38□□□□□ -0.43
VPS33B-205ENST00000556096 BET1O15155 118 aa12.38□□□□□ -0.43
VPS33B-205ENST00000556096 RCC1P18754 421 aaPredicted RBP12.38□□□□□ -0.43
VPS33B-205ENST00000556096 CHRNB4P30926 498 aa12.38□□□□□ -0.43
VPS33B-205ENST00000556096 RBMXP38159 391 aaKnown RBP12.38□□□□□ -0.43
VPS33B-205ENST00000556096 ZNF81P51508 661 aa12.38□□□□□ -0.43
VPS33B-205ENST00000556096 BSPH1Q075Z2 132 aa12.38□□□□□ -0.43
VPS33B-205ENST00000556096 SLC35E4Q6ICL7 350 aa12.38□□□□□ -0.43
VPS33B-205ENST00000556096 RTN4IP1Q8WWV3 396 aaPredicted RBP12.38□□□□□ -0.43
VPS33B-205ENST00000556096 NMES1Q9C002 83 aa12.38□□□□□ -0.43
VPS33B-205ENST00000556096 NAA60Q9H7X0 242 aa12.38□□□□□ -0.43
VPS33B-205ENST00000556096 COMMD9Q9P000 198 aa12.38□□□□□ -0.43
VPS33B-205ENST00000556096 TRBV6-7A0A0A0MS04 114 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 TRAV14DV4A0A0A6YYC5 116 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 SPRY3O43610 288 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 PSPNO60542 156 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 SLC25A4P12235 298 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 SERPINF1P36955 418 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 ADORA2A-AS1P86434 159 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 SORDQ00796 357 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 TMEM65Q6PI78 240 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 C5orf24Q7Z6I8 188 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 FAM185AQ8N0U4 392 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 CCDC71LQ8N9Z2 235 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 SEC22AQ96IW7 307 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 VRK1Q99986 396 aaPredicted RBP12.37□□□□□ -0.43
VPS33B-205ENST00000556096 SLC2A9Q9NRM0 540 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 IL19Q9UHD0 177 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 ERRFI1Q9UJM3 462 aaPredicted RBP12.37□□□□□ -0.43
VPS33B-205ENST00000556096 ITGB1BP2Q9UKP3 347 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 TRAPPC2LQ9UL33 140 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 BAHCC1Q9P281 2608 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 TMEM30CPA0ZSE6 113 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 C5orf51A6NDU8 294 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 FAM25EA8MYX2 175 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 L7N2F9 121 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 LHBP01229 141 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 CXCL2P19875 107 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 CEBPDP49716 269 aaPredicted RBP12.37□□□□□ -0.43
VPS33B-205ENST00000556096 RND3P61587 244 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 NDUFA5Q16718 116 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 ITLN1Q8WWA0 313 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 ERGIC1Q969X5 290 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms