RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 RPUSD1Q9UJJ7 312 aaKnown RBP10.31□□□□□ -0.76
SHMT2-221ENST00000555773 MGAT4AQ9UM21 535 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 LINC00312Q9Y6C7 94 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 TRAV20A0A0B4J274 112 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 KIR2DS1A0A191URI9 304 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 TMEM235A6NFC5 223 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 CYSRT1A8MQ03 144 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 SULT1C2O00338 296 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 ENSAO43768 121 aaKnown RBP10.3□□□□□ -0.76
SHMT2-221ENST00000555773 MSMBP08118 114 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 PPIAL4GP0DN37 164 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 GATA3P23771 443 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 DTYMKP23919 212 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 CBX5P45973 191 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 GNG2P59768 71 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 LCN2P80188 198 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 MRPS10P82664 201 aaKnown RBP10.3□□□□□ -0.76
SHMT2-221ENST00000555773 SRSF7Q16629 238 aaKnown RBP eCLIP10.3□□□□□ -0.76
SHMT2-221ENST00000555773 CYB5R2Q6BCY4 276 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 TRAT1Q6PIZ9 186 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 C1orf122Q6ZSJ8 110 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 ZNF554Q86TJ5 538 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 FGFRL1Q8N441 504 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 DTX3Q8N9I9 347 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 DYRK2Q92630 601 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 COX4I2Q96KJ9 171 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 SCPEP1Q9HB40 452 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 CHMP1AQ9HD42 196 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-221ENST00000555773 RAB9BQ9NP90 201 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 C19orf12Q9NSK7 152 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 ING3Q9NXR8 418 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 TAS2R3Q9NYW6 316 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 KIF25Q9UIL4 384 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 TRAPPC2LQ9UL33 140 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 UBE2J1Q9Y385 318 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-221ENST00000555773 ITPR3Q14573 2671 aa10.3□□□□□ -0.76
SHMT2-221ENST00000555773 IGHV2-70DA0A0C4DH43 119 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 A0A1W2PQ09 198 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 C22orf46C9J442 243 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 CTDSPLO15194 276 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 CGB3P0DN86 165 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 CGB7P0DN87 165 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 IGHV4-31P0DP07 118 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 PAX2Q02962 417 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 IL18Q14116 193 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 C6orf183Q5T699 404 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 OLFML2AQ68BL7 652 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 ZNF880Q6PDB4 577 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 FAM131AQ6UXB0 335 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 BTNL3Q6UXE8 466 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 MOB1BQ7L9L4 216 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 RTN4RL2Q86UN3 420 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 FAM185AQ8N0U4 392 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 CIARTQ8N365 385 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-221ENST00000555773 TPRX1Q8N7U7 411 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 MRPL30Q8TCC3 161 aaKnown RBP10.29□□□□□ -0.76
SHMT2-221ENST00000555773 DACT3Q96B18 629 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-221ENST00000555773 ABHD1Q96SE0 405 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 OCSTAMPQ9BR26 566 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 MBNL3Q9NUK0 354 aaKnown RBP10.29□□□□□ -0.76
SHMT2-221ENST00000555773 KCNIP1Q9NZI2 227 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 OPN4Q9UHM6 478 aa10.29□□□□□ -0.76
SHMT2-221ENST00000555773 A0A0G2JMP0 313 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 A0A0X1KG70 313 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 hCG_1809904A0A1W2PP81 198 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 A0A1W2PPE2 198 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 A0A1W2PR64 198 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 A0A1W2PRV1 198 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 ZNF729A6NN14 1252 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-221ENST00000555773 ORC5O43913 435 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 TGFAP01135 160 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 ZNF728P0DKX0 622 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 FOSL1P15407 271 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 DVL1P1P54792 670 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-221ENST00000555773 ZNF45Q02386 682 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 Q6ZS49 121 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 GLCCI1Q86VQ1 547 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 SNX29P2Q8IUI4 249 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 KIR3DL3Q8N743 410 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 MAPK1IP1LQ8NDC0 245 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 OR4M2Q8NGB6 313 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 OR4K15Q8NH41 348 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 CCDC107Q8WV48 283 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 S100ZQ8WXG8 99 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 TMEM186Q96B77 213 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 MSI2Q96DH6 328 aaKnown RBP10.28□□□□□ -0.76
SHMT2-221ENST00000555773 C18orf12Q96KH6 178 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 GAL3ST2Q9H3Q3 398 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 LINC00574Q9H8X3 128 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 LPAR2Q9HBW0 351 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 Q9N2K0 584 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 ELF5Q9UKW6 265 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-221ENST00000555773 INSIG2Q9Y5U4 225 aa10.28□□□□□ -0.76
SHMT2-221ENST00000555773 KBTBD11-OT1A0A1B0GTJ5 212 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 M0R1W7 72 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 SMAD7O15105 426 aaKnown RBP10.27□□□□□ -0.77
SHMT2-221ENST00000555773 SSX5O60225 188 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 RBP4P02753 201 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 LPLP06858 475 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 FCGR3AP08637 254 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms