RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 ST3GAL4Q11206 333 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 RIPK1Q13546 671 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 RBM39Q14498 530 aaKnown RBP11.05□□□□□ -0.64
PCNX4-209ENST00000555569 TMEM95Q3KNT9 176 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 NHLRC3Q5JS37 347 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 CCDC144NLQ6NUI1 221 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 NDUFA11Q86Y39 141 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 ZFP41Q8N8Y5 198 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 SUMF2Q8NBJ7 301 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 ZNF485Q8NCK3 441 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 MRGPRDQ8TDS7 321 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 S100A13Q99584 98 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 ZNF184Q99676 751 aaPredicted RBP11.05□□□□□ -0.64
PCNX4-209ENST00000555569 OCSTAMPQ9BR26 566 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 SLC25A33Q9BSK2 321 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 DPCDQ9BVM2 203 aaPredicted RBP11.05□□□□□ -0.64
PCNX4-209ENST00000555569 MMP28Q9H239 520 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 IFT22Q9H7X7 185 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 LINC00574Q9H8X3 128 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 PAK1IP1Q9NWT1 392 aaPredicted RBP11.05□□□□□ -0.64
PCNX4-209ENST00000555569 ZNF581Q9P0T4 197 aa11.05□□□□□ -0.64
PCNX4-209ENST00000555569 AMMECR1Q9Y4X0 333 aaPredicted RBP11.05□□□□□ -0.64
PCNX4-209ENST00000555569 EFCAB10A6NFE3 127 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 NPIPB11E5RHQ5 1161 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 J3QR06 171 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 GPX5O75715 221 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 OR7C1O76099 320 aaPredicted RBP11.04□□□□□ -0.64
PCNX4-209ENST00000555569 OR2F2O95006 317 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 SERPINA2P20848 420 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 MNDAP41218 407 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 TAS2R43P59537 309 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 RPS11P62280 158 aaKnown RBP eCLIP11.04□□□□□ -0.64
PCNX4-209ENST00000555569 LTC4SQ16873 150 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 Q499Y3 187 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 FBLN7Q53RD9 439 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 YIF1BQ5BJH7 314 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 LINC00596Q86U02 117 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 C8orf59Q8N0T1 100 aaPredicted RBP11.04□□□□□ -0.64
PCNX4-209ENST00000555569 RFESDQ8TAC1 157 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 LEAP2Q969E1 77 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 RPEQ96AT9 228 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 PGLYRP3Q96LB9 341 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 RBM14Q96PK6 669 aaKnown RBP11.04□□□□□ -0.64
PCNX4-209ENST00000555569 CITED2Q99967 270 aaPredicted RBP11.04□□□□□ -0.64
PCNX4-209ENST00000555569 PCDHB16Q9NRJ7 776 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 CNOT2Q9NZN8 540 aaKnown RBP11.04□□□□□ -0.64
PCNX4-209ENST00000555569 CKLFQ9UBR5 152 aa11.04□□□□□ -0.64
PCNX4-209ENST00000555569 TRAV39A0A0B4J263 110 aa11.03□□□□□ -0.64
PCNX4-209ENST00000555569 GEMIN2O14893 280 aaKnown RBP11.03□□□□□ -0.64
PCNX4-209ENST00000555569 XPNPEP2O43895 674 aa11.03□□□□□ -0.64
PCNX4-209ENST00000555569 ZNF780AO75290 641 aaPredicted RBP11.03□□□□□ -0.64
PCNX4-209ENST00000555569 IGHV3-7P01780 117 aa11.03□□□□□ -0.64
PCNX4-209ENST00000555569 GNAO1P09471 354 aa11.03□□□□□ -0.64
PCNX4-209ENST00000555569 FSTP19883 344 aa11.03□□□□□ -0.64
PCNX4-209ENST00000555569 MPV17LQ2QL34 196 aa11.03□□□□□ -0.64
PCNX4-209ENST00000555569 OGFRL1Q5TC84 451 aaPredicted RBP11.03□□□□□ -0.64
PCNX4-209ENST00000555569 OR10A7Q8NGE5 316 aa11.03□□□□□ -0.64
PCNX4-209ENST00000555569 TOMM40LQ969M1 308 aa11.03□□□□□ -0.64
PCNX4-209ENST00000555569 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.03□□□□□ -0.64
PCNX4-209ENST00000555569 PSG11Q9UQ72 335 aa11.03□□□□□ -0.64
PCNX4-209ENST00000555569 TRAV8-7A0A075B6U6 113 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 TRBV5-7A0A0A0MS05 114 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 PNMA8CA0A1B0GUJ8 204 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 A0A1W2PP11 408 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 TMEM30CPA0ZSE6 113 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 MAGEA13PA6NCF6 341 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 ADARB2-AS1A8MUL3 147 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 G3V4G9 280 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 CASQ2O14958 399 aaPredicted RBP11.02□□□□□ -0.65
PCNX4-209ENST00000555569 GTF2F2P13984 249 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 SSTR5P35346 364 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 GNG10P50151 68 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 GPR176Q14439 515 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 SLC22A6Q4U2R8 563 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 ABCA11PQ4W5N1 156 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 ATAD3CQ5T2N8 411 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 LAIR2Q6ISS4 152 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 SLC16A12Q6ZSM3 486 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 STX19Q8N4C7 294 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 OR4F17Q8NGA8 305 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 OR5AU1Q8NGC0 362 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 MUL1Q969V5 352 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 R3HDM4Q96D70 268 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 OR14A2Q96R54 314 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 OR4F4Q96R69 305 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 PSORS1C1Q9UIG5 152 aa11.02□□□□□ -0.65
PCNX4-209ENST00000555569 MRPS28Q9Y2Q9 187 aaKnown RBP11.02□□□□□ -0.65
PCNX4-209ENST00000555569 PRKDCP78527 4128 aaKnown RBP11.02□□□□□ -0.65
PCNX4-209ENST00000555569 A0A1W2PPK0 400 aa11.01□□□□□ -0.65
PCNX4-209ENST00000555569 FAM90A18PA6NE21 464 aa11.01□□□□□ -0.65
PCNX4-209ENST00000555569 FAM90A16PA6NEW6 464 aa11.01□□□□□ -0.65
PCNX4-209ENST00000555569 FAM90A20PA6NIJ5 464 aa11.01□□□□□ -0.65
PCNX4-209ENST00000555569 FAM90A9PA6NNJ1 464 aa11.01□□□□□ -0.65
PCNX4-209ENST00000555569 FAM90A12PA8MX19 464 aa11.01□□□□□ -0.65
PCNX4-209ENST00000555569 FAM90A5PA8MXJ8 464 aa11.01□□□□□ -0.65
PCNX4-209ENST00000555569 M0QZK8 103 aa11.01□□□□□ -0.65
PCNX4-209ENST00000555569 MYL12BO14950 172 aa11.01□□□□□ -0.65
PCNX4-209ENST00000555569 AMY1AP04745 511 aa11.01□□□□□ -0.65
PCNX4-209ENST00000555569 AMY2AP04746 511 aa11.01□□□□□ -0.65
PCNX4-209ENST00000555569 LPLP06858 475 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms