RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 PSMA1P25786 263 aaKnown RBP11.1□□□□□ -0.63
SHMT2-219ENST00000555563 FABP5Q01469 135 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 TRAM1Q15629 374 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 SSX1Q16384 188 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 SSX2Q16385 188 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 AANATQ16613 207 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 UTF1Q5T230 341 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 MINOS1Q5TGZ0 78 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 OR52W1Q6IF63 320 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 BRICD5Q6PL45 260 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 ABHD12Q8N2K0 398 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 OR4P4Q8NGL7 312 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 MRGPRDQ8TDS7 321 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 FAM46BQ96A09 425 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 SELENOIQ9C0D9 397 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 ZNF286AQ9HBT8 521 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 CALYQ9NYX4 217 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 RCC2Q9P258 522 aaKnown RBP11.1□□□□□ -0.63
SHMT2-219ENST00000555563 MMP24Q9Y5R2 645 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 MINOS1-NBL1R4GNA1 71 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 TMEM30CPA0ZSE6 113 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 VGLL3A8MV65 326 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 IL1AP01583 271 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 CD34P28906 385 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 GABRA5P31644 462 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 SSTR5P35346 364 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 FAM189A2Q15884 450 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 LY6EQ16553 131 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 C1orf100Q5SVJ3 147 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 GLT8D1Q68CQ7 371 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 SLC35E4Q6ICL7 350 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 NDNFQ8TB73 568 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 PIFOQ8TCI5 191 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 NEK7Q8TDX7 302 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 MALSU1Q96EH3 234 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 KIRREL1Q96J84 757 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 Q96M66 194 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 ZNF747Q9BV97 191 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 SLITRK2Q9H156 845 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 KCNK15Q9H427 330 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 BEX1Q9HBH7 125 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 SPACA1Q9HBV2 294 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 KIAA2026Q5HYC2 2103 aa11.09□□□□□ -0.63
SHMT2-219ENST00000555563 A0A087X0M5 115 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 A0A1B0GX30 115 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 FAM90A10PA6NDY2 464 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 FAM90A18PA6NE21 464 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 FAM90A16PA6NEW6 464 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 FAM90A20PA6NIJ5 464 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 FAM90A7PA6NKC0 464 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 FAM90A22PA8MWA6 464 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 FAM90A12PA8MX19 464 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 FAM90A5PA8MXJ8 464 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 FAM90A23PA8MXZ1 464 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 CHST1O43916 411 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 MRPS14O60783 128 aaKnown RBP11.08□□□□□ -0.64
SHMT2-219ENST00000555563 ARL6IP5O75915 188 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 FAM90A15PP0C7V4 464 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 FAM90A13PP0C7W8 464 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 FAM90A14PP0C7W9 464 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 FAM90A24PP0C7X0 464 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 JUNBP17275 347 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-219ENST00000555563 NFYBP25208 207 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 HTR1DP28221 377 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 EMX1Q04741 257 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-219ENST00000555563 OR10K2Q6IF99 312 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 RAB12Q6IQ22 244 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 Q6ZSV7 163 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 RTN4RL2Q86UN3 420 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 SVOPQ8N4V2 548 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 ZNF565Q8N9K5 539 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 ZNF596Q8TC21 504 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 WFDC12Q8WWY7 111 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 CYYR1Q96J86 154 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 GFI1Q99684 422 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 CST11Q9H112 138 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 LINC00574Q9H8X3 128 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 NDUFB11Q9NX14 153 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 GHRLQ9UBU3 117 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 HILPDAQ9Y5L2 63 aa11.08□□□□□ -0.64
SHMT2-219ENST00000555563 A0A1B0GUS0 222 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 CLPSL1A2RUU4 121 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 POM121CA8CG34 1229 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 MCRIP1C9JLW8 97 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 NPIPB11E5RHQ5 1161 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 AIPO00170 330 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 SLC22A1O15245 554 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 MPIG6BO95866 241 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 IGLV1-47P01700 117 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 UBBP0CG47 229 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 VSIG8P0DPA2 414 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 CD37P11049 281 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 CALRP27797 417 aaKnown RBP11.07□□□□□ -0.64
SHMT2-219ENST00000555563 HTR2CP28335 458 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 RAB13P51153 203 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 LTC4SQ16873 150 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 HLA-DRB5Q30154 266 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 OLFML2AQ68BL7 652 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 SIGIRRQ6IA17 410 aa11.07□□□□□ -0.64
SHMT2-219ENST00000555563 SHISA2Q6UWI4 295 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms