RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 FAM90A23PA8MXZ1 464 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 M0QZK8 103 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 MYL12BO14950 172 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 WIPF1O43516 503 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 CDRT1O95170 752 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 FAM90A15PP0C7V4 464 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 FAM90A13PP0C7W8 464 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 FAM90A14PP0C7W9 464 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 FAM90A24PP0C7X0 464 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 GTF2F2P13984 249 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 GDNFP39905 211 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 MNDAP41218 407 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 DOC2BQ14184 412 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 PIGYQ3MUY2 71 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 PLA1AQ53H76 456 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 TPTE2P1Q5T6R2 138 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 THNSL2Q86YJ6 484 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 STX19Q8N4C7 294 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 NANOGP1Q8N7R0 232 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 NKAIN3Q8N8D7 197 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 SUMF2Q8NBJ7 301 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 OR52M1Q8NGK5 317 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 OR13A1Q8NGR1 328 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 NR1H4Q96RI1 486 aaPredicted RBP9.5□□□□□ -0.89
VRK1-204ENST00000555351 NKX3-1Q99801 234 aaPredicted RBP9.5□□□□□ -0.89
VRK1-204ENST00000555351 DPCDQ9BVM2 203 aaPredicted RBP9.5□□□□□ -0.89
VRK1-204ENST00000555351 MMP28Q9H239 520 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 IDI2-AS1Q9NZ38 188 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 TMEM30CPA0ZSE6 113 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 J3QR06 171 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 XPNPEP2O43895 674 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 OR7C1O76099 320 aaPredicted RBP9.49□□□□□ -0.89
VRK1-204ENST00000555351 OR2F2O95006 317 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 TSPAN15O95858 294 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 GLAP06280 429 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 GLP1RP43220 463 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 EMX1Q04741 257 aaPredicted RBP9.49□□□□□ -0.89
VRK1-204ENST00000555351 RBM39Q14498 530 aaKnown RBP9.49□□□□□ -0.89
VRK1-204ENST00000555351 TMEM30BQ3MIR4 351 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 Q3ZCU0 254 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 BAIAP2L2Q6UXY1 529 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 AHSA2Q719I0 299 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 TMEM219Q86XT9 240 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 LYPD6Q86Y78 171 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 MS4A15Q8N5U1 240 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 C8orf31Q8N9H6 132 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 OR13C5Q8NGS8 318 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 OR10K1Q8NGX5 313 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 PLPPR1Q8TBJ4 325 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 CAPSLQ8WWF8 208 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 RBM14Q96PK6 669 aaKnown RBP9.49□□□□□ -0.89
VRK1-204ENST00000555351 DERL3Q96Q80 235 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 UQCC2Q9BRT2 126 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 RAB9BQ9NP90 201 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 RCC2Q9P258 522 aaKnown RBP9.49□□□□□ -0.89
VRK1-204ENST00000555351 GHRLQ9UBU3 117 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 ING4Q9UNL4 249 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 ERGIC3Q9Y282 383 aa9.49□□□□□ -0.89
VRK1-204ENST00000555351 TRAV8-7A0A075B6U6 113 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 FAM90A9PA6NNJ1 464 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 GEMIN2O14893 280 aaKnown RBP9.48□□□□□ -0.89
VRK1-204ENST00000555351 ORC5O43913 435 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 FBXO24O75426 580 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 CA11O75493 328 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 OPN1MWP04001 364 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 FAM106CPP0CH98 169 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 OPN1MW2P0DN77 364 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 OPN1MW3P0DN78 364 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 VSIG10L2P0DP72 767 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 CELP19835 753 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 RAB7AP51149 207 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 DEFA6Q01524 100 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 MADCAM1Q13477 382 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 GPR50Q13585 617 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 NDUFA11Q86Y39 141 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 OR8H3Q8N146 312 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 GAPTQ8N292 157 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 BPIFB6Q8NFQ5 453 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 MYDGFQ969H8 173 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 OR14A2Q96R54 314 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 OCSTAMPQ9BR26 566 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 MND1Q9BWT6 205 aa9.48□□□□□ -0.89
VRK1-204ENST00000555351 MRPS28Q9Y2Q9 187 aaKnown RBP9.48□□□□□ -0.89
VRK1-204ENST00000555351 HSPB6O14558 160 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 CDK1P06493 297 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 SERPINA2P20848 420 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 NFYBP25208 207 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 VDAC2P45880 294 aaPredicted RBP9.47□□□□□ -0.89
VRK1-204ENST00000555351 BLCAPP62952 87 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 SLC22A6Q4U2R8 563 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 PDLIM3Q53GG5 364 aaPredicted RBP9.47□□□□□ -0.89
VRK1-204ENST00000555351 C6orf141Q5SZD1 244 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 TRAT1Q6PIZ9 186 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 UNQ9370/PRO34162Q6UXP9 181 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 ZNF497Q6ZNH5 498 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 ZNF554Q86TJ5 538 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 JAGN1Q8N5M9 183 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 LINC00311Q8N616 119 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 ZFP41Q8N8Y5 198 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 MRGPRDQ8TDS7 321 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms