RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 WSB1Q9Y6I7 421 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 ZNF780BQ9Y6R6 833 aa3.54□□□□□ -1.84
VRK1-203ENST00000555067 CHD2O14647 1828 aaKnown RBP3.54□□□□□ -1.84
VRK1-203ENST00000555067 ANKRD30AQ9BXX3 1397 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 IGLV11-55A0A075B6I3 123 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 IGHV2-26A0A0B4J1V2 119 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 IGHV3-66A0A0C4DH42 116 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 A0A0G2JMP0 313 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 A0A0X1KG70 313 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 C5orf63A6NC05 138 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 GYG2O15488 501 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 ANGPTL7O43827 346 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 OR2A4O95047 310 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 SLC25A14O95258 325 aaPredicted RBP3.53□□□□□ -1.84
VRK1-203ENST00000555067 PRB2P02812 416 aaPredicted RBP3.53□□□□□ -1.84
VRK1-203ENST00000555067 IL6P05231 212 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 ZNF708P17019 499 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 ME2P23368 584 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 AGTR1P30556 359 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 NAA20P61599 178 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 PPP1CAP62136 330 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 SLC35A2P78381 396 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 EIF4EBP2Q13542 120 aaPredicted RBP3.53□□□□□ -1.84
VRK1-203ENST00000555067 SSX1Q16384 188 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 IL17AQ16552 155 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 HIST3H3Q16695 136 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 UBE2NLQ5JXB2 153 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 SFXN4Q6P4A7 337 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 IGFL2Q6UWQ7 119 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 OLIG3Q7RTU3 272 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 LINC00596Q86U02 117 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 NAA40Q86UY6 237 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 ZIC4Q8N9L1 334 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 LINC01006Q8NI28 216 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 ORAOV1Q8WV07 137 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 OR2A7Q96R45 310 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 NOX3Q9HBY0 568 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 CA10Q9NS85 328 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 PARVAQ9NVD7 372 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 TAS2R5Q9NYW4 299 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 GLTPQ9NZD2 209 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 POLR1DQ9Y2S0 133 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 V9GYQ6 96 aa3.53□□□□□ -1.84
VRK1-203ENST00000555067 EIF3AQ14152 1382 aaKnown RBP3.52□□□□□ -1.85
VRK1-203ENST00000555067 CAMSAP1Q5T5Y3 1602 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 IGLV1-50A0A075B6I6 118 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 LOC102724200A0A096LPH7 203 aaPredicted RBP3.52□□□□□ -1.85
VRK1-203ENST00000555067 IGHV5-51A0A0C4DH38 117 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 M0QYV0 167 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 COX7A2P2O60397 106 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 H2BFSP57053 126 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 IGLV3-21P80748 117 aaPredicted RBP3.52□□□□□ -1.85
VRK1-203ENST00000555067 ZNF684Q5T5D7 378 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 FAM222AQ5U5X8 452 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 NXNL2Q5VZ03 156 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 GLYATQ6IB77 296 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 FAM19A3Q7Z5A8 133 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 ZNF429Q86V71 674 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 LRRC25Q8N386 305 aaPredicted RBP3.52□□□□□ -1.85
VRK1-203ENST00000555067 SLC25A45Q8N413 288 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 OR51D1Q8NGF3 324 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 OR11L1Q8NGX0 322 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 OR1L1Q8NH94 360 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 TMBIM1Q969X1 311 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 CAMK2N2Q96S95 79 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 ANAPC13Q9BS18 74 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 GID8Q9NWU2 228 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 VPS29Q9UBQ0 182 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 ZNF223Q9UK11 482 aaPredicted RBP3.52□□□□□ -1.85
VRK1-203ENST00000555067 POMPQ9Y244 141 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 BTRCQ9Y297 605 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 LSM5Q9Y4Y9 91 aaKnown RBP3.52□□□□□ -1.85
VRK1-203ENST00000555067 ZNF706Q9Y5V0 76 aaPredicted RBP3.52□□□□□ -1.85
VRK1-203ENST00000555067 ARL5AQ9Y689 179 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 ADAMTS13Q76LX8 1427 aa3.52□□□□□ -1.85
VRK1-203ENST00000555067 GPATCH8Q9UKJ3 1502 aaKnown RBP3.51□□□□□ -1.85
VRK1-203ENST00000555067 IGHV1OR15-9A0A0B4J2B8 117 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 A0A1B0GVX0 72 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 OR5H1A6NKK0 313 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 CHP2O43745 196 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 KCNK2O95069 426 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 CYB5R3P00387 301 aaPredicted RBP3.51□□□□□ -1.85
VRK1-203ENST00000555067 ATP5G1P05496 136 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 SOD3P08294 240 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 IL3P08700 152 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 TLX1NBP0CAT3 122 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 UCHL3P15374 230 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 ZNF19P17023 458 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 TGFBR2P37173 567 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 MAGEA12P43365 314 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 LHX2P50458 406 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 SPCS3P61009 180 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 RAP1AP62834 184 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 IFITM2Q01629 132 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 IHHQ14623 411 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 PAFAH1B3Q15102 231 aaKnown RBP3.51□□□□□ -1.85
VRK1-203ENST00000555067 MAPK14Q16539 360 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 MESTQ5EB52 335 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 CENPWQ5EE01 88 aa3.51□□□□□ -1.85
VRK1-203ENST00000555067 ZNF773Q6PK81 442 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms