RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 OR6Q1Q8NGQ2 317 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 DYRK2Q92630 601 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 DACT3Q96B18 629 aaPredicted RBP8.42□□□□□ -1.06
SYNE2-215ENST00000554997 DIRAS2Q96HU8 199 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 COX4I2Q96KJ9 171 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 WDFY2Q96P53 400 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 SOSTQ9BQB4 213 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 TMUB1Q9BVT8 246 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 AUNIPQ9H7T9 357 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 MMP26Q9NRE1 261 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 C19orf12Q9NSK7 152 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 OR6C3Q9NZP0 311 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 RABL2AQ9UBK7 228 aaPredicted RBP8.42□□□□□ -1.06
SYNE2-215ENST00000554997 EXTL2Q9UBQ6 330 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 KIF25Q9UIL4 384 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 RABL2BQ9UNT1 228 aa8.42□□□□□ -1.06
SYNE2-215ENST00000554997 UBE2J1Q9Y385 318 aaPredicted RBP8.42□□□□□ -1.06
SYNE2-215ENST00000554997 MAP1AP78559 2803 aaPredicted RBP8.41□□□□□ -1.06
SYNE2-215ENST00000554997 TRAV20A0A0B4J274 112 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 IGHV2-70DA0A0C4DH43 119 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 A0A1W2PPH5 198 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 FABP12A6NFH5 140 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 C22orf46C9J442 243 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 SMAD7O15105 426 aaKnown RBP8.41□□□□□ -1.06
SYNE2-215ENST00000554997 ENSAO43768 121 aaKnown RBP8.41□□□□□ -1.06
SYNE2-215ENST00000554997 CD3GP09693 182 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 CD99P14209 185 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 GATA3P23771 443 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 PRSS3P35030 304 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 TAS2R20P59543 309 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 SRSF7Q16629 238 aaKnown RBP eCLIP8.41□□□□□ -1.06
SYNE2-215ENST00000554997 CNIH2Q6PI25 160 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 BAIAP2L2Q6UXY1 529 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 CCDC190Q86UF4 302 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 RTN4RL2Q86UN3 420 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 TMEM186Q96B77 213 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 CYYR1Q96J86 154 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 ABHD1Q96SE0 405 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 CMSS1Q9BQ75 279 aaKnown RBP8.41□□□□□ -1.06
SYNE2-215ENST00000554997 LPAR2Q9HBW0 351 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 ING3Q9NXR8 418 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 TAS2R3Q9NYW6 316 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 PTTG2Q9NZH5 202 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 ELF5Q9UKW6 265 aaPredicted RBP8.41□□□□□ -1.06
SYNE2-215ENST00000554997 TRAPPC2LQ9UL33 140 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 MRPS7Q9Y2R9 242 aaKnown RBP8.41□□□□□ -1.06
SYNE2-215ENST00000554997 LINC00312Q9Y6C7 94 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 F8P00451 2351 aa8.41□□□□□ -1.06
SYNE2-215ENST00000554997 TEP1Q99973 2627 aaKnown RBP8.4□□□□□ -1.06
SYNE2-215ENST00000554997 MED13LQ71F56 2210 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 TRGV10A0A0A0MS01 117 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 A0A1W2PQ09 198 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 ORC5O43913 435 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 INHBBP09529 407 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 PTBP1P26599 531 aaKnown RBP eCLIP8.4□□□□□ -1.06
SYNE2-215ENST00000554997 ETV6P41212 452 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 DVL1P1P54792 670 aaPredicted RBP8.4□□□□□ -1.06
SYNE2-215ENST00000554997 MRPS15P82914 257 aaKnown RBP8.4□□□□□ -1.06
SYNE2-215ENST00000554997 PAX8Q06710 450 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 ARFRP1Q13795 201 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 ZNF880Q6PDB4 577 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 BTNL3Q6UXE8 466 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 ZNF554Q86TJ5 538 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 IZUMO1Q8IYV9 350 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 FAM185AQ8N0U4 392 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 C11orf42Q8N5U0 333 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 OR4K15Q8NH41 348 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 MRPL30Q8TCC3 161 aaKnown RBP8.4□□□□□ -1.06
SYNE2-215ENST00000554997 CCDC107Q8WV48 283 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 OCSTAMPQ9BR26 566 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 LINC00574Q9H8X3 128 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 CHMP1AQ9HD42 196 aaPredicted RBP8.4□□□□□ -1.06
SYNE2-215ENST00000554997 C12orf4Q9NQ89 552 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 MBNL3Q9NUK0 354 aaKnown RBP8.4□□□□□ -1.06
SYNE2-215ENST00000554997 HIF1ANQ9NWT6 349 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 KCNIP1Q9NZI2 227 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 OPN4Q9UHM6 478 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 MGAT4AQ9UM21 535 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 INSIG2Q9Y5U4 225 aa8.4□□□□□ -1.06
SYNE2-215ENST00000554997 A0A0G2JMP0 313 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 A0A0X1KG70 313 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 KBTBD11-OT1A0A1B0GTJ5 212 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 hCG_1809904A0A1W2PP81 198 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 A0A1W2PPE2 198 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 A0A1W2PR64 198 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 A0A1W2PRV1 198 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 TMEM235A6NFC5 223 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 ZNF729A6NN14 1252 aaPredicted RBP8.39□□□□□ -1.07
SYNE2-215ENST00000554997 C17orf98A8MV24 154 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 M0R1W7 72 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 SULT1C2O00338 296 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 SSX5O60225 188 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 RBP4P02753 201 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 ZNF728P0DKX0 622 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 RCC1P18754 421 aaPredicted RBP8.39□□□□□ -1.07
SYNE2-215ENST00000554997 DTYMKP23919 212 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 CBX5P45973 191 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 DLX6P56179 175 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 GNG2P59768 71 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 ARF6P62330 175 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms