RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 AKR7LQ8NHP1 331 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 C1QTNF5Q9BXJ0 243 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 ZNF701Q9NV72 531 aaPredicted RBP14.78□□□□□ -0.04
SHOX-204ENST00000554971 USF3Q68DE3 2245 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 FAM90A10PA6NDY2 464 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 FAM90A18PA6NE21 464 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 FAM90A16PA6NEW6 464 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 FAM90A20PA6NIJ5 464 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 FAM90A8PA6NJQ4 464 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 FAM90A7PA6NKC0 464 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 FAM90A22PA8MWA6 464 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 FAM90A12PA8MX19 464 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 FAM90A5PA8MXJ8 464 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 FAM90A23PA8MXZ1 464 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 SDCBPO00560 298 aaPredicted RBP14.78□□□□□ -0.04
SHOX-204ENST00000554971 FAM90A15PP0C7V4 464 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 FAM90A13PP0C7W8 464 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 FAM90A14PP0C7W9 464 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 FAM90A24PP0C7X0 464 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 COX5BP10606 129 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 GABRR1P24046 479 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 CHATP28329 748 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 FAM3AP98173 230 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 COLCA1Q6ZS62 124 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 TMEM204Q9BSN7 226 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 TMEM100Q9NV29 134 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 TAS2R3Q9NYW6 316 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 GPR160Q9UJ42 338 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 ARFGEF3Q5TH69 2177 aa14.77□□□□□ -0.04
SHOX-204ENST00000554971 MAST4O15021 2626 aa14.77□□□□□ -0.04
SHOX-204ENST00000554971 FAM230AA0A1W2PPH8 454 aa14.77□□□□□ -0.04
SHOX-204ENST00000554971 ABCD4O14678 606 aa14.77□□□□□ -0.04
SHOX-204ENST00000554971 CCL2P13500 99 aa14.77□□□□□ -0.04
SHOX-204ENST00000554971 PDZK1IP1Q13113 114 aa14.77□□□□□ -0.04
SHOX-204ENST00000554971 C3orf36Q3SXR2 165 aa14.77□□□□□ -0.04
SHOX-204ENST00000554971 EIF5AL1Q6IS14 154 aaKnown RBP14.77□□□□□ -0.04
SHOX-204ENST00000554971 TMEM108Q6UXF1 575 aa14.77□□□□□ -0.04
SHOX-204ENST00000554971 OSR2Q8N2R0 312 aa14.77□□□□□ -0.04
SHOX-204ENST00000554971 OR2AE1Q8NHA4 323 aa14.77□□□□□ -0.04
SHOX-204ENST00000554971 RNF141Q8WVD5 230 aa14.77□□□□□ -0.04
SHOX-204ENST00000554971 MARC2Q969Z3 335 aa14.77□□□□□ -0.04
SHOX-204ENST00000554971 CMSS1Q9BQ75 279 aaKnown RBP14.77□□□□□ -0.04
SHOX-204ENST00000554971 ZNF2Q9BSG1 426 aaPredicted RBP14.77□□□□□ -0.04
SHOX-204ENST00000554971 ESRP2Q9H6T0 727 aaKnown RBP14.77□□□□□ -0.04
SHOX-204ENST00000554971 NGBQ9NPG2 151 aa14.77□□□□□ -0.04
SHOX-204ENST00000554971 KCNIP3Q9Y2W7 256 aa14.77□□□□□ -0.04
SHOX-204ENST00000554971 ARID1AO14497 2285 aa14.77□□□□□ -0.04
SHOX-204ENST00000554971 SCO1O75880 301 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 IFNA21P01568 189 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 OR5H8P0DN80 308 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 PTAFRP25105 342 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 HGFACQ04756 655 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 ADAM5Q6NVV9 412 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 DPPA2Q7Z7J5 298 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 Q8NFD4 153 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 LILRB1Q8NHL6 650 aaPredicted RBP14.76□□□□□ -0.05
SHOX-204ENST00000554971 C14orf79Q96F83 325 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 IGKV1-27A0A075B6S5 117 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 IGHV2OR16-5A0A0B4J2B6 119 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 CRYM-AS1A6NIL9 109 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 SHISA9B4DS77 424 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 H0YIZ8 118 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 TLE4Q04727 773 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 NKAPLQ5M9Q1 402 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 ELP2Q6IA86 826 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 NEUROG1Q92886 237 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 ZFP57Q9NU63 452 aa14.76□□□□□ -0.05
SHOX-204ENST00000554971 LOC105371267A0A1B0GV96 52 aa14.75□□□□□ -0.05
SHOX-204ENST00000554971 ADAP1O75689 374 aa14.75□□□□□ -0.05
SHOX-204ENST00000554971 UCP3P55916 312 aa14.75□□□□□ -0.05
SHOX-204ENST00000554971 KRTAP10-9P60411 292 aa14.75□□□□□ -0.05
SHOX-204ENST00000554971 TAF9Q16594 264 aa14.75□□□□□ -0.05
SHOX-204ENST00000554971 SRSF7Q16629 238 aaKnown RBP eCLIP14.75□□□□□ -0.05
SHOX-204ENST00000554971 SAXO1Q8IYX7 474 aa14.75□□□□□ -0.05
SHOX-204ENST00000554971 GALNT14Q96FL9 552 aa14.75□□□□□ -0.05
SHOX-204ENST00000554971 CYTL1Q9NRR1 136 aa14.75□□□□□ -0.05
SHOX-204ENST00000554971 AK3Q9UIJ7 227 aa14.75□□□□□ -0.05
SHOX-204ENST00000554971 MYO9AB2RTY4 2548 aa14.75□□□□□ -0.05
SHOX-204ENST00000554971 ATP6V1G2-DDX39BF2Z307 99 aa14.74□□□□□ -0.05
SHOX-204ENST00000554971 FCGR3AP08637 254 aa14.74□□□□□ -0.05
SHOX-204ENST00000554971 PI3P19957 117 aa14.74□□□□□ -0.05
SHOX-204ENST00000554971 SPERTQ8NA61 448 aa14.74□□□□□ -0.05
SHOX-204ENST00000554971 OR10C1Q96KK4 312 aa14.74□□□□□ -0.05
SHOX-204ENST00000554971 POM121L2Q96KW2 1035 aa14.74□□□□□ -0.05
SHOX-204ENST00000554971 FAAP24Q9BTP7 215 aa14.74□□□□□ -0.05
SHOX-204ENST00000554971 PDCD6O75340 191 aa14.74□□□□□ -0.05
SHOX-204ENST00000554971 ZNF92Q03936 586 aa14.74□□□□□ -0.05
SHOX-204ENST00000554971 MALLQ13021 153 aa14.74□□□□□ -0.05
SHOX-204ENST00000554971 FAM74A1Q5RGS3 127 aa14.74□□□□□ -0.05
SHOX-204ENST00000554971 LRTM2Q8N967 370 aa14.74□□□□□ -0.05
SHOX-204ENST00000554971 LHFPL5Q8TAF8 219 aa14.74□□□□□ -0.05
SHOX-204ENST00000554971 SAT2Q96F10 170 aaPredicted RBP14.74□□□□□ -0.05
SHOX-204ENST00000554971 ZNF286AQ9HBT8 521 aa14.74□□□□□ -0.05
SHOX-204ENST00000554971 RNF115Q9Y4L5 304 aa14.74□□□□□ -0.05
SHOX-204ENST00000554971 OTOGQ6ZRI0 2925 aa14.73□□□□□ -0.05
SHOX-204ENST00000554971 IGKV1D-8A0A087WSZ0 117 aa14.73□□□□□ -0.05
SHOX-204ENST00000554971 LGALS8O00214 317 aa14.73□□□□□ -0.05
SHOX-204ENST00000554971 SPRY1O43609 319 aaPredicted RBP14.73□□□□□ -0.05
SHOX-204ENST00000554971 ANGPTL7O43827 346 aa14.73□□□□□ -0.05
SHOX-204ENST00000554971 KNG1P01042 644 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms