RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 OR10D4PQ8NGN7 298 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 OR4A4PQ8NGN8 299 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 PSENENQ9NZ42 101 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 ZNF319Q9P2F9 582 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 LIPGQ9Y5X9 500 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 HS3ST3B1Q9Y662 390 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 TLN2Q9Y4G6 2542 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 PCDH15Q96QU1 1955 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 A0A1W2PPQ1 181 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 C17orf112F2Z3M2 114 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 HSD17B6O14756 317 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 PHOX2AO14813 284 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 SPINT2O43291 252 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 ELLP55199 621 aaPredicted RBP3.39□□□□□ -1.87
KTN1-217ENST00000554831 PRDX4Q13162 271 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 CSRP2Q16527 193 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 SLC35G3Q8N808 338 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 TMEM178AQ8NBL3 297 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 NFAM1Q8NET5 270 aaPredicted RBP3.39□□□□□ -1.87
KTN1-217ENST00000554831 TMEM18Q96B42 140 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 THOC3Q96J01 351 aaKnown RBP3.39□□□□□ -1.87
KTN1-217ENST00000554831 ADGRG7Q96K78 797 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 FAM173AQ9BQD7 235 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 ACTR3CQ9C0K3 210 aaPredicted RBP3.39□□□□□ -1.87
KTN1-217ENST00000554831 TMEM222Q9H0R3 208 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.39□□□□□ -1.87
KTN1-217ENST00000554831 CACNG5Q9UF02 275 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 MAP1LC3B2A6NCE7 125 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 FAM166BA8MTA8 275 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 H3BQ15 152 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 ACTL6BO94805 426 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 ONECUT2O95948 504 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 CCL4P13236 92 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 KITLGP21583 273 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 CD200P41217 278 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 RBM11P57052 281 aaKnown RBP3.39□□□□□ -1.87
KTN1-217ENST00000554831 LPAL2Q16609 132 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 CLEC9AQ6UXN8 241 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 H2BFWTQ7Z2G1 175 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 MRGPRGQ86SM5 289 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 MRPL41Q8IXM3 137 aaKnown RBP3.39□□□□□ -1.87
KTN1-217ENST00000554831 H1FOOQ8IZA3 346 aaPredicted RBP3.39□□□□□ -1.87
KTN1-217ENST00000554831 M1APQ8TC57 530 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 TMEM230Q96A57 120 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 USB1Q9BQ65 265 aaKnown RBP3.39□□□□□ -1.87
KTN1-217ENST00000554831 ZPBPQ9BS86 351 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 MAP1LC3BQ9GZQ8 125 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 GCM1Q9NP62 436 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 CCL28Q9NRJ3 127 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 TUBD1Q9UJT1 453 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 USP9XQ93008 2570 aaPredicted RBP3.39□□□□□ -1.87
KTN1-217ENST00000554831 IGLV3-32A0A0A0MS00 114 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 A0A1B0GU03 582 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 MED19A0JLT2 244 aaPredicted RBP3.39□□□□□ -1.87
KTN1-217ENST00000554831 DBX1A6NMT0 343 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 ZNF17P17021 662 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 CCL1P22362 96 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 SUPT4H1P63272 117 aaKnown RBP3.39□□□□□ -1.87
KTN1-217ENST00000554831 ARG2P78540 354 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 PSG4Q00888 419 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 BSXQ3C1V8 233 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 PIGYQ3MUY2 71 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 C6orf15Q6UXA7 325 aaPredicted RBP3.39□□□□□ -1.87
KTN1-217ENST00000554831 TBC1D26Q86UD7 250 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 UBALD2Q8IYN6 164 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 GAPTQ8N292 157 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 LILRB1Q8NHL6 650 aaPredicted RBP3.39□□□□□ -1.87
KTN1-217ENST00000554831 HIST1H2BAQ96A08 127 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 SDSLQ96GA7 329 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 MARS2Q96GW9 593 aaKnown RBP3.39□□□□□ -1.87
KTN1-217ENST00000554831 RTBDNQ9BSG5 229 aaPredicted RBP3.39□□□□□ -1.87
KTN1-217ENST00000554831 PLEKHA3Q9HB20 300 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 OR2W1Q9Y3N9 320 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 ATP23Q9Y6H3 246 aa3.39□□□□□ -1.87
KTN1-217ENST00000554831 PLXNA2O75051 1894 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 IGHV5-10-1A0A0J9YXX1 117 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 A0A1W2PPH5 198 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 A0A1W2PQM1 296 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 EPOPA6NHQ4 379 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 TRDCB7Z8K6 153 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 J3QT63 122 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 HSPB1P04792 205 aaKnown RBP3.38□□□□□ -1.87
KTN1-217ENST00000554831 GRPP07492 148 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 FGF5P12034 268 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 PPP1CCP36873 323 aaKnown RBP3.38□□□□□ -1.87
KTN1-217ENST00000554831 TMEM241Q24JQ0 296 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 TBC1D28Q2M2D7 210 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 C4orf17Q53FE4 359 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 ZNF66Q6ZN08 573 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 CNEP1R1Q8N9A8 125 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 OR10AD1Q8NGE0 317 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 CLDN23Q96B33 292 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 GALMQ96C23 342 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 OR2H1Q9GZK4 316 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 DOK5Q9P104 306 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 ZMAT5Q9UDW3 170 aaKnown RBP3.38□□□□□ -1.87
KTN1-217ENST00000554831 PLXNB3Q9ULL4 1909 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 SETD2Q9BYW2 2564 aaPredicted RBP3.38□□□□□ -1.87
KTN1-217ENST00000554831 hCG_1809904A0A1W2PP81 198 aa3.38□□□□□ -1.87
KTN1-217ENST00000554831 A0A1W2PR64 198 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms