RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 EEF1AKMT1Q8WVE0 214 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 LRRC58Q96CX6 371 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 RASD2Q96D21 266 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 RNF145Q96MT1 663 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 TSSK3Q96PN8 268 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 TSPAN32Q96QS1 320 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 DHRS9Q9BPW9 319 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 KCNS3Q9BQ31 491 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 CENPKQ9BS16 269 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 CHID1Q9BWS9 393 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 POTEKPQ9BYX7 375 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 IFI27L2Q9H2X8 130 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 OR51B5Q9H339 312 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 RPF2Q9H7B2 306 aaKnown RBP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 BEX1Q9HBH7 125 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 CRLF2Q9HC73 371 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 NLE1Q9NVX2 485 aaPredicted RBP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 DCAF16Q9NXF7 216 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 SHPKQ9UHJ6 478 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 RWDD2AQ9UIY3 292 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 MCTS1Q9ULC4 181 aaKnown RBP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 SLC22A7Q9Y694 548 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 U3KQK5 164 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 RNF213Q63HN8 5207 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 SRRM2Q9UQ35 2752 aaKnown RBP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 DMBT1Q9UGM3 2413 aaPredicted RBP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 SORL1Q92673 2214 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 IGLV4-69A0A075B6H9 119 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 TRAV39A0A0B4J263 110 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 PLAC8L1A1L4L8 177 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 OR5H1A6NKK0 313 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 hCG_2039718K7EN88 272 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 RNF13O43567 381 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 SNAI2O43623 268 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 CDH16O75309 829 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 PSIP1O75475 530 aaKnown RBP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 CBR3O75828 277 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 TTC4O95801 387 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 C6orf47O95873 294 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 IGKV3-11P04433 115 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 ERCC1P07992 297 aaPredicted RBP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 ERGP11308 486 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 CCL2P13500 99 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF43P17038 809 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 ME2P23368 584 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 EVI2BP34910 448 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 CDKN2BP42772 138 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 SLC1A2P43004 574 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 UBE2AP49459 152 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 TTPAP49638 278 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 PPOXP50336 477 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 IDH3GP51553 393 aaPredicted RBP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 NCBP2P52298 156 aaKnown RBP eCLIP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 RAP1GDS1P52306 607 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 RAB25P57735 213 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 EIF3EP60228 445 aaKnown RBP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 RAB10P61026 200 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 STXBP1P61764 594 aaKnown RBP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 FOXF1Q12946 379 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 SLAMF1Q13291 335 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 MADCAM1Q13477 382 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 ITIH4Q14624 930 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 CLINT1Q14677 625 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 PDK2Q15119 407 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 TRIP13Q15645 432 aaPredicted RBP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 DEFB112Q30KQ8 113 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 TRMT12Q53H54 448 aaKnown RBP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 XKR7Q5GH72 579 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 ANKRD22Q5VYY1 191 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 HBMQ6B0K9 141 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 FAM45BPQ6NSW5 357 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 C16orf87Q6PH81 154 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 LYPD2Q6UXB3 125 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 CASP12Q6UXS9 341 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF493Q6ZR52 646 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 MARCH3Q86UD3 253 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 PLCZ1Q86YW0 608 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 PCP2Q8IVA1 136 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 C1orf174Q8IYL3 243 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 CNPY4Q8N129 248 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 PDIK1LQ8N165 341 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 RPP25LQ8N5L8 163 aaKnown RBP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 Q8N976 141 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 MORN4Q8NDC4 146 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 C19orf18Q8NEA5 215 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 OR52R1Q8NGF1 315 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 NUBPLQ8TB37 319 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF596Q8TC21 504 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 CD200R1Q8TD46 325 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 CCL17Q92583 94 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 YIPF5Q969M3 257 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 EXOSC8Q96B26 276 aaKnown RBP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 MS4A6EQ96DS6 147 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 CHMP6Q96FZ7 201 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 ZFP3Q96NJ6 502 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 BIRC8Q96P09 236 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 QKIQ96PU8 341 aaKnown RBP eCLIP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 P2RX4Q99571 388 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 ATP5SQ99766 215 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 EBNA1BP2Q99848 306 aaKnown RBP0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms