RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 MPPED2Q15777 294 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 SLC22A6Q4U2R8 563 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 PLAC9Q5JTB6 97 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 FAM201AQ5SY85 155 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 BPIFB2Q8N4F0 458 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 BOLLQ8N9W6 283 aaKnown RBP10.36□□□□□ -0.75
SHMT2-214ENST00000554604 SPERTQ8NA61 448 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 BEST4Q8NFU0 473 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 OR8B3Q8NGG8 313 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 OR8S1Q8NH09 359 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 Q8TCH9 128 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 NPRL2Q8WTW4 380 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 DVL3Q92997 716 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-214ENST00000554604 BORCS8Q96FH0 119 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 NEIL1Q96FI4 390 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-214ENST00000554604 HYLS1Q96M11 299 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 OR8B2Q96RD0 313 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 TMEM246Q9BRR3 403 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 BANF2Q9H503 90 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 ZMAT3Q9HA38 289 aaKnown RBP10.36□□□□□ -0.75
SHMT2-214ENST00000554604 IFT46Q9NQC8 304 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 RNF7Q9UBF6 113 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 OPN4Q9UHM6 478 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 SCP2D1Q9UJQ7 156 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 ELF5Q9UKW6 265 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-214ENST00000554604 POLR3KQ9Y2Y1 108 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-214ENST00000554604 AUP1Q9Y679 476 aa10.36□□□□□ -0.75
SHMT2-214ENST00000554604 A0A1W2PP11 408 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 hCG_1807616A0A1W2PRN6 198 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 A6NLC8 198 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 A8MXK9 166 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 TRAPPC2LH3BP13 241 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 RGS13O14921 159 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 SOCS1O15524 211 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 CREBL2O60519 120 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-214ENST00000554604 VENTXO95231 258 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 FSTL3O95633 263 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 AMY2AP04746 511 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 GRPP07492 148 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 ANXA7P20073 488 aaKnown RBP10.35□□□□□ -0.75
SHMT2-214ENST00000554604 FPR2P25090 351 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 FUT6P51993 359 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 ATP1B3P54709 279 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 IFITM2Q01629 132 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 ZNF154Q13106 437 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 ACTBL2Q562R1 376 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 RNASE10Q5GAN6 216 aaKnown RBP10.35□□□□□ -0.75
SHMT2-214ENST00000554604 BTNL3Q6UXE8 466 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 DEFB108BQ8NET1 73 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 PXT1Q8NFP0 134 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 OR51T1Q8NGJ9 327 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 OR5D18Q8NGL1 313 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 ZFAND1Q8TCF1 268 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 NUDCD2Q8WVJ2 157 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 JMJD8Q96S16 334 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 PRRT1Q99946 306 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 OCSTAMPQ9BR26 566 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 SEC22CQ9BRL7 303 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 SUCNR1Q9BXA5 334 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 TINAGL1Q9GZM7 467 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-214ENST00000554604 METTL9Q9H1A3 318 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 RANBP3Q9H6Z4 567 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-214ENST00000554604 BEX1Q9HBH7 125 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 IL36GQ9NZH8 169 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 ZNF222Q9UK12 451 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 SLC7A11Q9UPY5 501 aa10.35□□□□□ -0.75
SHMT2-214ENST00000554604 FBN3Q75N90 2809 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 SERPINE3A8MV23 424 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 M0QYG6 137 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 ZNF780AO75290 641 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-214ENST00000554604 TMEM225BP0DP42 221 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 VSIG10L2P0DP72 767 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 CXCL3P19876 107 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 SERPINA2P20848 420 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 IDO2Q6ZQW0 420 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 FTMTQ8N4E7 242 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 CSNK2A3Q8NEV1 391 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 CCDC107Q8WV48 283 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 CAPSLQ8WWF8 208 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 C22orf15Q8WYQ4 148 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 SLC6A7Q99884 636 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 ZNF436Q9C0F3 470 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-214ENST00000554604 PCDHB16Q9NRJ7 776 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 C1orf123Q9NWV4 160 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 CLN8Q9UBY8 286 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 KCNK7Q9Y2U2 307 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 INSIG2Q9Y5U4 225 aa10.34□□□□□ -0.75
SHMT2-214ENST00000554604 TENM1Q9UKZ4 2725 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 IGKV1-27A0A075B6S5 117 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 FAM230AA0A1W2PPH8 454 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 TMEM82A0PJX8 343 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 UBE2QL1A1L167 161 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 C3orf80F5H4A9 247 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 FABP7O15540 132 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 AKR7A2O43488 359 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 PTBP3O95758 552 aaKnown RBP10.33□□□□□ -0.76
SHMT2-214ENST00000554604 CST4P01036 141 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 RLN1P04808 185 aa10.33□□□□□ -0.76
SHMT2-214ENST00000554604 BLVRBP30043 206 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-214ENST00000554604 HILS1P60008 231 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms