RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 CYLC2Q14093 348 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-228ENST00000554592 VWC2Q2TAL6 325 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 ABCA11PQ4W5N1 156 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 LDLRAD2Q5SZI1 272 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 LCN8Q6JVE9 175 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 NANOGP8Q6NSW7 305 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 ZFP1Q6P2D0 407 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 PLBD1Q6P4A8 553 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 ERICH5Q6P6B1 374 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 ADAMTSL5Q6ZMM2 481 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 OR2W3Q7Z3T1 314 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 ZNF695Q8IW36 515 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 ZNF561Q8N587 486 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 COMMD1Q8N668 190 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 OR4M1Q8NGD0 313 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 OR4K13Q8NH42 304 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 OR5P3Q8WZ94 311 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 REEP6Q96HR9 211 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 TPD52L3Q96J77 140 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 RNF170Q96K19 258 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 NMNAT3Q96T66 252 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 TSC22D3Q99576 134 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 EBF4Q9BQW3 602 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 COPS4Q9BT78 406 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 PAPOLGQ9BWT3 736 aaKnown RBP3.8□□□□□ -1.8
ATXN3-228ENST00000554592 Q9H521 79 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 ANKRD19PQ9H560 264 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 VCX3AQ9NNX9 186 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 ABCB9Q9NP78 766 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 RPRD1BQ9NQG5 326 aaKnown RBP3.8□□□□□ -1.8
ATXN3-228ENST00000554592 CENPMQ9NSP4 180 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 MRPL22Q9NWU5 206 aaKnown RBP3.8□□□□□ -1.8
ATXN3-228ENST00000554592 RASL12Q9NYN1 266 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 ZNF222Q9UK12 451 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 ZNF256Q9Y2P7 627 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-228ENST00000554592 HILPDAQ9Y5L2 63 aa3.8□□□□□ -1.8
ATXN3-228ENST00000554592 RFPL4AA6NLU0 287 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 ZNF850A8MQ14 1090 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 BBIP1A8MTZ0 92 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 SEC14L6B5MCN3 397 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 PRR23D1E9PI22 279 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-228ENST00000554592 RFPL4AL1F8VTS6 287 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 H0YJX3 145 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 SLC1A7O00341 560 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 CASQ2O14958 399 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-228ENST00000554592 IDH3BO43837 385 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 OR2F2O95006 317 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 CST4P01036 141 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 APOC1P02654 83 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 RBP4P02753 201 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 TFAP2AP05549 437 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 ZNF728P0DKX0 622 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 PRR23D2P0DMB1 279 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-228ENST00000554592 IGHV1-8P0DP01 117 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 SLC2A1P11166 492 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 HIST1H1CP16403 213 aaKnown RBP3.79□□□□□ -1.8
ATXN3-228ENST00000554592 ANOS1P23352 680 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 VEGFCP49767 419 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 LUMP51884 338 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-228ENST00000554592 ARHGDIBP52566 201 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 DLX6P56179 175 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 RAB25P57735 213 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 ZNF273Q14593 569 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 RCN1Q15293 331 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 SMARCD3Q6STE5 483 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 ZBTB49Q6ZSB9 765 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 C18orf65Q6ZTR6 163 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 KCTD8Q6ZWB6 473 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 ZNF329Q86UD4 541 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 ZDHHC21Q8IVQ6 265 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 TIGD4Q8IY51 512 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 CD177Q8N6Q3 437 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 KLHL30-AS1Q8NEE0 82 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 OR5M8Q8NGP6 311 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 NDNFQ8TB73 568 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 CHPT1Q8WUD6 406 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 PIGCQ92535 297 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 ISOC1Q96CN7 298 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 RBM14Q96PK6 669 aaKnown RBP3.79□□□□□ -1.8
ATXN3-228ENST00000554592 ERMAPQ96PL5 475 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-228ENST00000554592 OR51I2Q9H344 312 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 RGCCQ9H4X1 137 aa3.79□□□□□ -1.8
ATXN3-228ENST00000554592 HUWE1Q7Z6Z7 4374 aaKnown RBP3.79□□□□□ -1.8
ATXN3-228ENST00000554592 hCG_38984A0A1B0GV85 526 aa3.78□□□□□ -1.8
ATXN3-228ENST00000554592 RBMY1BA6NDE4 496 aaKnown RBP3.78□□□□□ -1.8
ATXN3-228ENST00000554592 RBMY1EA6NEQ0 496 aaKnown RBP3.78□□□□□ -1.8
ATXN3-228ENST00000554592 ZNF732B4DXR9 585 aa3.78□□□□□ -1.8
ATXN3-228ENST00000554592 ZNF593O00488 134 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-228ENST00000554592 DENRO43583 198 aaKnown RBP3.78□□□□□ -1.8
ATXN3-228ENST00000554592 NPPAP01160 153 aa3.78□□□□□ -1.8
ATXN3-228ENST00000554592 SNRNP70P08621 437 aaKnown RBP3.78□□□□□ -1.8
ATXN3-228ENST00000554592 RBMY1DP0C7P1 496 aaKnown RBP3.78□□□□□ -1.8
ATXN3-228ENST00000554592 COX4I1P13073 169 aa3.78□□□□□ -1.8
ATXN3-228ENST00000554592 CD24P25063 80 aa3.78□□□□□ -1.8
ATXN3-228ENST00000554592 HTR1DP28221 377 aa3.78□□□□□ -1.8
ATXN3-228ENST00000554592 SLC6A6P31641 620 aa3.78□□□□□ -1.8
ATXN3-228ENST00000554592 OMPP47874 163 aa3.78□□□□□ -1.8
ATXN3-228ENST00000554592 OR3A4PP47883 348 aa3.78□□□□□ -1.8
ATXN3-228ENST00000554592 CX3CR1P49238 355 aa3.78□□□□□ -1.8
ATXN3-228ENST00000554592 NUDT2P50583 147 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms