RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 WDR13Q9H1Z4 485 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 UBQLN3Q9H347 655 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 SAP30LQ9HAJ7 183 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 SLCO1C1Q9NYB5 712 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 ALPLP05186 524 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 DNLZQ5SXM8 178 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 GPX8Q8TED1 209 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 TFAP2AP05549 437 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 CCL8P80075 99 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 FAM27D1Q5T7N8 215 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 PEAR1Q5VY43 1037 aaPredicted RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 GDPGP1Q6ZNW5 385 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 NKAIN4Q8IVV8 208 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 OR6T1Q8NGN1 323 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 CLEC2DQ9UHP7 191 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 SLIT1O75093 1534 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 A0A0G2JK05 382 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 TMEM129A0AVI4 362 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 C7orf71A4D174 169 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 SERINC4A6NH21 518 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 TAAR5O14804 337 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 ADRA1AP35348 466 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 BTNL8Q6UX41 500 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 AMDHD2Q9Y303 409 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 ZNF32P17041 273 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 CNR1P21554 472 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 FHL5Q5TD97 284 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 NPFFO15130 113 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 GNLYP22749 145 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 PGGHGQ32M88 737 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 SERTAD4-AS1Q5TG53 156 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 MBNL2Q5VZF2 373 aaKnown RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 WDR25Q64LD2 544 aaPredicted RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 BHLHA15Q7RTS1 189 aaPredicted RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 VN1R2Q8NFZ6 395 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 OR1L6Q8NGR2 347 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 NRGNQ92686 78 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 RHOFQ9HBH0 211 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 NDRG4Q9ULP0 352 aaKnown RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 PPIFP30405 207 aaKnown RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 RANP62826 216 aaKnown RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 Q6ZN92 141 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 ARRDC2Q8TBH0 407 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 SLAMF6Q96DU3 332 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 C18orf15Q96N68 181 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 DOK1Q99704 481 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 CLEC7AQ9BXN2 247 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 POLDIP2Q9Y2S7 368 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 COL14A1Q05707 1796 aaKnown RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 IER3P46695 156 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 SLC37A1P57057 533 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 FAM53AQ6NSI3 398 aaPredicted RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 B3GNT9Q6UX72 402 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 DTD2Q96FN9 168 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 C1QTNF3Q9BXJ4 246 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 RAB9BQ9NP90 201 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 COL3A1P02461 1466 aaPredicted RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 ISG15P05161 165 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 CTF1Q16619 201 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 TMEM196Q5HYL7 178 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 LEMD1Q68G75 181 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 FAM122BQ7Z309 247 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 PATJQ8NI35 1801 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 VAMP8Q9BV40 100 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 ACTR3CQ9C0K3 210 aaPredicted RBP2.91□□□□□ -1.94
SYNE2-212ENST00000554584 LRP6O75581 1613 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 LINC01387J3KSC0 135 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 CTSBP07858 339 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 SRMP19623 302 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 RNASE4P34096 147 aaKnown RBP2.91□□□□□ -1.94
SYNE2-212ENST00000554584 FUT7Q11130 342 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 GUK1Q16774 197 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 HIKESHIQ53FT3 197 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 OR10D4PQ8NGN7 298 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 OR9G4Q8NGQ1 327 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 FGF20Q9NP95 211 aaPredicted RBP2.91□□□□□ -1.94
SYNE2-212ENST00000554584 SLC7A10Q9NS82 523 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 NTMQ9P121 344 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 ACSM4P0C7M7 580 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 SLC17A1Q14916 467 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 RBMS2Q15434 407 aaKnown RBP2.91□□□□□ -1.94
SYNE2-212ENST00000554584 UMODL1-AS1Q8N2C9 162 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 BVESQ8NE79 360 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 PCNX3Q9H6A9 2034 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 DDX60Q8IY21 1712 aaKnown RBP2.91□□□□□ -1.94
SYNE2-212ENST00000554584 SIGLEC1Q9BZZ2 1709 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 FOXI3A8MTJ6 420 aaPredicted RBP2.91□□□□□ -1.94
SYNE2-212ENST00000554584 J3QW42 95 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 RAF1P04049 648 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 TCRBP04435 133 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 AVPR2P30518 371 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 CEACAM6P40199 344 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 KIAA1644Q3SXP7 199 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 ZNF770Q6IQ21 691 aaPredicted RBP2.91□□□□□ -1.94
SYNE2-212ENST00000554584 C16orf82Q7Z2V1 217 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 ZNF300Q96RE9 604 aaPredicted RBP2.91□□□□□ -1.94
SYNE2-212ENST00000554584 NAT8BQ9UHF3 227 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 PSMB1P20618 241 aaKnown RBP2.91□□□□□ -1.94
SYNE2-212ENST00000554584 NPBWR2P48146 333 aa2.91□□□□□ -1.94
SYNE2-212ENST00000554584 DUSP5Q16690 384 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms