RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 TFF1P04155 84 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 DAOP14920 347 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 MGMTP16455 207 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 PRKACAP17612 351 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 EFNB2P52799 333 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 ATP5J2P56134 94 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 GMFBP60983 142 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 FGF12P61328 243 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 SSBP2P81877 361 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-212ENST00000554486 DYNC1I2Q13409 638 aaKnown RBP5.23□□□□□ -1.57
SCFD1-212ENST00000554486 GPR176Q14439 515 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 PIGYQ3MUY2 71 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 ANXA2RQ3ZCQ2 193 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 NHLRC3Q5JS37 347 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 METAP1DQ6UB28 335 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-212ENST00000554486 ACP7Q6ZNF0 438 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 OR2W3Q7Z3T1 314 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 Q8IYB0 196 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 FAM58AQ8N1B3 248 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 OSR2Q8N2R0 312 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 C19orf18Q8NEA5 215 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 OR51T1Q8NGJ9 327 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 OR11L1Q8NGX0 322 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 MCFD2Q8NI22 146 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 KCNG3Q8TAE7 436 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 FAM110DQ8TAY7 271 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-212ENST00000554486 ACOT12Q8WYK0 555 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 CCL17Q92583 94 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 FAM46BQ96A09 425 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 PERPQ96FX8 193 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 CYYR1Q96J86 154 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 LURAP1Q96LR2 239 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 MIXL1Q9H2W2 232 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 RASL12Q9NYN1 266 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 ABRACLQ9P1F3 81 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 RAB22AQ9UL26 194 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 ETV7Q9Y603 341 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 A3GALT2U3KPV4 340 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 PRRC2AP48634 2157 aaKnown RBP5.23□□□□□ -1.57
SCFD1-212ENST00000554486 MALRD1Q5VYJ5 2156 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 KIAA2026Q5HYC2 2103 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 IGKV1D-17A0A075B6S4 117 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 RFPL4AA6NLU0 287 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 LRRC30A6NM36 301 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 FOXI3A8MTJ6 420 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-212ENST00000554486 CLDN25C9JDP6 229 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 RFPL4AL1F8VTS6 287 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 LGALS8O00214 317 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 TNFRSF13BO14836 293 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-212ENST00000554486 GEMIN2O14893 280 aaKnown RBP5.22□□□□□ -1.57
SCFD1-212ENST00000554486 SSX4O60224 188 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 HPGDSO60760 199 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 ZNF780AO75290 641 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-212ENST00000554486 CRTAPO75718 401 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-212ENST00000554486 CLPXO76031 633 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 IGHV2-70P01814 119 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 EIF4EP06730 217 aaKnown RBP5.22□□□□□ -1.57
SCFD1-212ENST00000554486 PSG2P11465 335 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 GTF2F2P13984 249 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 IRF2P14316 349 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 GLRA1P23415 457 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 DNASE1P24855 282 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 RANBP1P43487 201 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 PCP4P48539 62 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 CEBPDP49716 269 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-212ENST00000554486 BMXP51813 675 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 CAPZA1P52907 286 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 SNU13P55769 128 aaKnown RBP5.22□□□□□ -1.57
SCFD1-212ENST00000554486 RBM11P57052 281 aaKnown RBP5.22□□□□□ -1.57
SCFD1-212ENST00000554486 RPS27AP62979 156 aaKnown RBP5.22□□□□□ -1.57
SCFD1-212ENST00000554486 ZNF146Q15072 292 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 ZMYND11Q15326 602 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 HFEQ30201 348 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 DEFB113Q30KQ7 82 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 SMIM21Q3B7S5 101 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 ZNF404Q494X3 552 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 TEX36Q5VZQ5 186 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 STUMQ69YW2 141 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 SIGIRRQ6IA17 410 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 Q6P435 159 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 RTN4RL2Q86UN3 420 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 LAX1Q8IWV1 398 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 C1orf87Q8N0U7 546 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 FAM89BQ8N5H3 189 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 ZNF525Q8N782 197 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 SAMD12Q8N8I0 201 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 OR5T2Q8NGG2 359 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 C2CD4CQ8TF44 421 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 AP3S1Q92572 193 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 EMG1Q92979 244 aaKnown RBP5.22□□□□□ -1.57
SCFD1-212ENST00000554486 PTX4Q96A99 478 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 MRPS24Q96EL2 167 aaKnown RBP5.22□□□□□ -1.57
SCFD1-212ENST00000554486 S100A13Q99584 98 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 GAL3ST1Q99999 423 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 NICN1Q9BSH3 213 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 TM2D1Q9BX74 207 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 TMEM59Q9BXS4 323 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 SELENOIQ9C0D9 397 aa5.22□□□□□ -1.57
SCFD1-212ENST00000554486 C6orf62Q9GZU0 229 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-212ENST00000554486 CST11Q9H112 138 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms