RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 FUT6P51993 359 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 KRBOX4Q5JUW0 171 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 LYG2Q86SG7 212 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 ZADH2Q8N4Q0 377 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 SPSB4Q96A44 273 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 PLA2G2EQ9NZK7 142 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 AK3Q9UIJ7 227 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 AGPAT2O15120 278 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 HOXB5P09067 269 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 RELQ04864 619 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-212ENST00000554467 RTP5Q14D33 572 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 ADAM5Q6NVV9 412 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 IL34Q6ZMJ4 242 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 FAM214BQ7L5A3 538 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 BAP18Q8IXM2 172 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 OR10AD1Q8NGE0 317 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 CA5BP1Q8WTZ4 195 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 MISP3Q96FF7 219 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 FIGNL2A6NMB9 653 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 ZNF732B4DXR9 585 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 OR7C1O76099 320 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-212ENST00000554467 FCGR3AP08637 254 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 SELEP16581 610 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 BCL3P20749 454 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 LPAR6P43657 344 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 RAB2AP61019 212 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 STX12Q86Y82 276 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 OSR2Q8N2R0 312 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 OR13G1Q8NGZ3 307 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 TM2D1Q9BX74 207 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 CHMP1AQ9HD42 196 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-212ENST00000554467 LPAR3Q9UBY5 353 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 CD300LBA8K4G0 201 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 CA6P23280 308 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 KIR2DL2P43627 348 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-212ENST00000554467 C21orf62-AS1Q17RA5 79 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 ALKBH6Q3KRA9 238 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 FAM24BQ8N5W8 94 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 EMG1Q92979 244 aaKnown RBP10.01□□□□□ -0.81
SHMT2-212ENST00000554467 RNF126Q9BV68 326 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 MSGN1A6NI15 193 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 SYNGR1O43759 233 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 SS18L1O75177 396 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-212ENST00000554467 ARG1P05089 322 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 COX5BP10606 129 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 SFTPCP11686 197 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 CD80P33681 288 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 UBE2NP61088 152 aaKnown RBP10.01□□□□□ -0.81
SHMT2-212ENST00000554467 HOXA4Q00056 320 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-212ENST00000554467 CHRFAM7AQ494W8 412 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 RPUSD3Q6P087 351 aaKnown RBP10.01□□□□□ -0.81
SHMT2-212ENST00000554467 IGF2-ASQ6U949 168 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 SECTM1Q8WVN6 248 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 C20orf24Q9BUV8 137 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 OPN3Q9H1Y3 402 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-212ENST00000554467 FZR1Q9UM11 496 aa10.01□□□□□ -0.81
SHMT2-212ENST00000554467 SPCS3P61009 180 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 PNLIPRP3Q17RR3 467 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 ZDHHC23Q8IYP9 409 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 SNIP1Q8TAD8 396 aaKnown RBP10□□□□□ -0.81
SHMT2-212ENST00000554467 OR2J1Q9GZK6 312 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 OPA3Q9H6K4 179 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 ZNF391Q9UJN7 358 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 H0YIZ8 118 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 HOXA5P20719 270 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 GLRA1P23415 457 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 HOGA1Q86XE5 327 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 C17orf78Q8N4C9 275 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 ZSCAN4Q8NAM6 433 aaPredicted RBP10□□□□□ -0.81
SHMT2-212ENST00000554467 TERB2Q8NHR7 220 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 SMIM8Q96KF7 97 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 NUDT16L1Q9BRJ7 211 aaKnown RBP10□□□□□ -0.81
SHMT2-212ENST00000554467 PARP12Q9H0J9 701 aaKnown RBP10□□□□□ -0.81
SHMT2-212ENST00000554467 C7orf77A4D0Y5 90 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 NUDT19A8MXV4 375 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 AQP7O14520 342 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 SNRNP70P08621 437 aaKnown RBP10□□□□□ -0.81
SHMT2-212ENST00000554467 TPT1P13693 172 aaKnown RBP10□□□□□ -0.81
SHMT2-212ENST00000554467 ZBTB25P24278 435 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 DAZAP2Q15038 168 aaPredicted RBP10□□□□□ -0.81
SHMT2-212ENST00000554467 ACSF3Q4G176 576 aaPredicted RBP10□□□□□ -0.81
SHMT2-212ENST00000554467 AWAT1Q58HT5 328 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 REC114Q7Z4M0 266 aa10□□□□□ -0.81
SHMT2-212ENST00000554467 TEX13DA0A0J9YY54 714 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-212ENST00000554467 CEACAM4O75871 244 aa9.99□□□□□ -0.81
SHMT2-212ENST00000554467 SCGB1D2O95969 90 aa9.99□□□□□ -0.81
SHMT2-212ENST00000554467 SLC25A42Q86VD7 318 aa9.99□□□□□ -0.81
SHMT2-212ENST00000554467 SARAFQ96BY9 339 aa9.99□□□□□ -0.81
SHMT2-212ENST00000554467 C5orf66Q9H5L9 145 aa9.99□□□□□ -0.81
SHMT2-212ENST00000554467 ZNF442Q9H7R0 627 aa9.99□□□□□ -0.81
SHMT2-212ENST00000554467 SLC2A8Q9NY64 477 aa9.99□□□□□ -0.81
SHMT2-212ENST00000554467 DKK4Q9UBT3 224 aa9.99□□□□□ -0.81
SHMT2-212ENST00000554467 ZNF107Q9UII5 783 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-212ENST00000554467 PLCE1Q9P212 2302 aa9.99□□□□□ -0.81
SHMT2-212ENST00000554467 TPRP12270 2363 aaKnown RBP9.99□□□□□ -0.81
SHMT2-212ENST00000554467 SERPINE3A8MV23 424 aa9.99□□□□□ -0.81
SHMT2-212ENST00000554467 CHATP28329 748 aa9.99□□□□□ -0.81
SHMT2-212ENST00000554467 ZNF610Q8N9Z0 462 aa9.99□□□□□ -0.81
SHMT2-212ENST00000554467 SMIM3Q9BZL3 60 aa9.99□□□□□ -0.81
SHMT2-212ENST00000554467 MTCH1Q9NZJ7 389 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms