RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ABOP16442 354 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 RPL35AP18077 110 aaKnown RBP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 TNFRSF1BP20333 461 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 MAOAP21397 527 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 RPL12P30050 165 aaKnown RBP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 PYCR1P32322 319 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 SPRP35270 261 aaPredicted RBP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 OPRM1P35372 400 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 RFC3P40938 356 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 APOBEC1P41238 236 aaKnown RBP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 GDF5P43026 501 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 KIR2DL3P43628 341 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 OR1D4P47884 311 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 CRISP3P54108 245 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 TAS2R43P59537 309 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 PPP3R1P63098 170 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 SRYQ05066 204 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 MXD1Q05195 221 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 GAGE5Q13069 117 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 GAGE6Q13070 117 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 TAF9Q16594 264 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF239Q16600 458 aaKnown RBP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 LTC4SQ16873 150 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 NKPD1Q17RQ9 610 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 DEFB110Q30KQ9 67 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 CEACAM21Q3KPI0 293 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 TCTEX1D4Q5JR98 221 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 C6orf141Q5SZD1 244 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 LDLRAD2Q5SZI1 272 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 STUMQ69YW2 141 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 PAQR6Q6TCH4 344 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 CD164L2Q6UWJ8 174 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 PAMR1Q6UXH9 720 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 VN1R4Q7Z5H5 301 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 C5orf24Q7Z6I8 188 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 APRG1Q8IVJ8 170 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 BCL6BQ8N143 479 aaPredicted RBP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 BEST3Q8N1M1 668 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 C11orf42Q8N5U0 333 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 TERB2Q8NHR7 220 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 UCN3Q969E3 161 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 TM4SF18Q96CE8 201 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 Q96MF0 132 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 RCHY1Q96PM5 261 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 SIGLEC12Q96PQ1 595 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 DUX3Q96PT4 197 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 OR52E6Q96RD3 313 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 NRTNQ99748 197 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 OR11A1Q9GZK7 315 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 MEGF9Q9H1U4 602 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF665Q9H7R5 613 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 RLIMQ9NVW2 624 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 PKIGQ9Y2B9 76 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 ETV7Q9Y603 341 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 LRBAP50851 2863 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 BOD1L1Q8NFC6 3051 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 EML6Q6ZMW3 1958 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 GTF3C1Q12789 2109 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 HIVEP1P15822 2718 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 CELSR2Q9HCU4 2923 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 TRBV9A0A0B4J1U6 114 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 TCRBV5S2A0A599 114 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 PPP5D1E7EU14 171 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 HMGB3O15347 200 aaKnown RBP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 P2RX6O15547 441 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 WDR1O75083 606 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 GGCTO75223 188 aaKnown RBP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 NDUFA7O95182 113 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF682O95780 498 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 HLA-AP01891 365 aaKnown RBP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 HPXP02790 462 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 REG1AP05451 166 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 HIST1H1BP16401 226 aaKnown RBP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF17P17021 662 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 ALOX5APP20292 161 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 RPL13AP40429 203 aaKnown RBP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 CX3CR1P49238 355 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 WNT4P56705 351 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 MFGE8Q08431 387 aaPredicted RBP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 ECH1Q13011 328 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 OR5I1Q13606 314 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 FAAP20Q6NZ36 180 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 STEAP1BQ6NZ63 245 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF613Q6PF04 617 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 Q6ZT83 130 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 LANCL3Q6ZV70 420 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 LARP4Q71RC2 724 aaKnown RBP eCLIP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 DTX2Q86UW9 622 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 GLCCI1Q86VQ1 547 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 IZUMO1Q8IYV9 350 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 CLDN19Q8N6F1 224 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 WDR31Q8NA23 367 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 OR5AU1Q8NGC0 362 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 OR51Q1Q8NH59 317 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 SKA2Q8WVK7 121 aaPredicted RBP2.3□□□□□ -2.04
PRPF39-206ENST00000554429 IGFBPL1Q8WX77 278 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 RND1Q92730 232 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 MRAP2Q96G30 205 aa2.3□□□□□ -2.04
PRPF39-206ENST00000554429 TMEM19Q96HH6 336 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms