RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 OR4K15Q8NH41 348 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 ENKURQ8TC29 256 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 COQ2Q96H96 371 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 PRRT1Q99946 306 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 TMEM246Q9BRR3 403 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 RAB9BQ9NP90 201 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 LPAR3Q9UBY5 353 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 OPN4Q9UHM6 478 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 ZNF230Q9UIE0 474 aaPredicted RBP6.38□□□□□ -1.39
TDP1-209ENST00000554180 METRNQ9UJH8 293 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 SCP2D1Q9UJQ7 156 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 DYSFO75923 2080 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 UTP20O75691 2785 aaKnown RBP6.37□□□□□ -1.39
TDP1-209ENST00000554180 UNC79Q9P2D8 2635 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 DSCAMO60469 2012 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 LINC00854A0A1B0GVQ3 168 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 FAM240BA0A1B0GVZ2 78 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 ODAMA1E959 279 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 TRDCB7Z8K6 153 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 NPIPB11E5RHQ5 1161 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 GPR37O15354 613 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 FABP7O15540 132 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 ADAM20O43506 726 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 ZNF205O95201 554 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 IFNA6P05013 189 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 GIFP27352 417 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 OR3A3P47888 321 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 HLA-DRB3P79483 266 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 CDK10Q15131 360 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 RBMS2Q15434 407 aaKnown RBP6.37□□□□□ -1.39
TDP1-209ENST00000554180 HMGN3Q15651 99 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 C11orf91Q3C1V1 193 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 PLA1AQ53H76 456 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 LRRC10Q5BKY1 277 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 KRBOX4Q5JUW0 171 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 ZNF787Q6DD87 383 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 Q6ZPA2 131 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 NLRC3Q7RTR2 1065 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 CENPSQ8N2Z9 138 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 FAM216BQ8N7L0 139 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 ZNRF1Q8ND25 227 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 OR4D10Q8NGI6 311 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 OR4A4PQ8NGN8 299 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 MARVELD3Q96A59 401 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 CREB3L1Q96BA8 519 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 CYYR1Q96J86 154 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 CCL13Q99616 98 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 SLC25A21Q9BQT8 299 aaPredicted RBP6.37□□□□□ -1.39
TDP1-209ENST00000554180 CABLES2Q9BTV7 478 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 GSX2Q9BZM3 304 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 DPAGT1Q9H3H5 408 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 NECAP2Q9NVZ3 263 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 MCUBQ9NWR8 336 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 KCNIP1Q9NZI2 227 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 OR6C3Q9NZP0 311 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 SLC25A10Q9UBX3 287 aaPredicted RBP6.37□□□□□ -1.39
TDP1-209ENST00000554180 MIOXQ9UGB7 285 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 KIF25Q9UIL4 384 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 TRAPPC2LQ9UL33 140 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 PCDHB10Q9UN67 800 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 LRBAP50851 2863 aa6.37□□□□□ -1.39
TDP1-209ENST00000554180 IGKV1D-8A0A087WSZ0 117 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 MEIKINA0A087WXM9 373 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 TRBV23-1A0A0A0MS06 115 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 CEACAM18A8MTB9 384 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 LYNX1G3V0Z9 82 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 M0QYG6 137 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 NDUFS8O00217 210 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 PPIHO43447 177 aaKnown RBP6.36□□□□□ -1.39
TDP1-209ENST00000554180 NDUFB3O43676 98 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 LY6HO94772 140 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 NDUFB6O95139 128 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 IGHV4-39P01824 125 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 AMY2AP04746 511 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 FCER2P06734 321 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 ZNF735P0CB33 412 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 OR5H8P0DN80 308 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 LYNX1P0DP58 116 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 RPS2P15880 293 aaKnown RBP6.36□□□□□ -1.39
TDP1-209ENST00000554180 RCC1P18754 421 aaPredicted RBP6.36□□□□□ -1.39
TDP1-209ENST00000554180 GZMHP20718 246 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 RBMXP38159 391 aaKnown RBP6.36□□□□□ -1.39
TDP1-209ENST00000554180 ECI1P42126 302 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 GLP1RP43220 463 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 GPR6P46095 362 aaPredicted RBP6.36□□□□□ -1.39
TDP1-209ENST00000554180 NPY4RP50391 375 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 PDLIM4P50479 330 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 RAG2P55895 527 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 MEF2CQ06413 473 aaPredicted RBP6.36□□□□□ -1.39
TDP1-209ENST00000554180 AESQ08117 197 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 SURF2Q15527 256 aaPredicted RBP6.36□□□□□ -1.39
TDP1-209ENST00000554180 CR1LQ2VPA4 569 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 TMEM30BQ3MIR4 351 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 FAAP20Q6NZ36 180 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 PLET1Q6UQ28 207 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 CCBE1Q6UXH8 406 aaPredicted RBP6.36□□□□□ -1.39
TDP1-209ENST00000554180 ZNF782Q6ZMW2 699 aaPredicted RBP6.36□□□□□ -1.39
TDP1-209ENST00000554180 Q6ZNX1 250 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 ZNF565Q8N9K5 539 aa6.36□□□□□ -1.39
TDP1-209ENST00000554180 OR51S1Q8NGJ8 323 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms