RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ANAPC10Q9UM13 185 aa12.08□□□□□ -0.48
SHMT2-208ENST00000553868 TRAV38-1A0A0B4J264 116 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 TRAV24A0A0B4J272 114 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 MEIS3P1A6NDR6 274 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 RFPL4AA6NLU0 287 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 OR2AT4A6NND4 320 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 RFPL4AL1F8VTS6 287 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 LGALS8O00214 317 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 SIRPB1O00241 398 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 PRDX2P32119 198 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 MRPS11P82912 194 aaKnown RBP12.07□□□□□ -0.48
SHMT2-208ENST00000553868 MEF2DQ14814 521 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 KCNJ8Q15842 424 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 OLFML2AQ68BL7 652 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 HOGA1Q86XE5 327 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 RDH5Q92781 318 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 CACNG6Q9BXT2 260 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 C11orf54Q9H0W9 315 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-208ENST00000553868 ETAA1Q9NY74 926 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 KCNS2Q9ULS6 477 aa12.07□□□□□ -0.48
SHMT2-208ENST00000553868 PLCE1Q9P212 2302 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 FAM240BA0A1B0GVZ2 78 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 OOEPA6NGQ2 149 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 NKX6-3A6NJ46 265 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 TMEM178BH3BS89 294 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-208ENST00000553868 SLC33A1O00400 549 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-208ENST00000553868 VENTXO95231 258 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 CYB5R3P00387 301 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-208ENST00000553868 CD8AP01732 235 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 PSG2P11465 335 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 NAT1P18440 290 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 AMY2BP19961 511 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 CD80P33681 288 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 TAS2R46P59540 309 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 OXA1LQ15070 435 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 SRSF7Q16629 238 aaKnown RBP eCLIP12.06□□□□□ -0.48
SHMT2-208ENST00000553868 RNASE10Q5GAN6 216 aaKnown RBP12.06□□□□□ -0.48
SHMT2-208ENST00000553868 TEX36Q5VZQ5 186 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 STEAP1BQ6NZ63 245 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 DCDC5Q6ZRR9 648 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 RTN4RL2Q86UN3 420 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 CCL17Q92583 94 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 ST6GALNAC5Q9BVH7 336 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 HRASLSQ9HDD0 168 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 ZNF581Q9P0T4 197 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 COPZ2Q9P299 210 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 MGAT4AQ9UM21 535 aa12.06□□□□□ -0.48
SHMT2-208ENST00000553868 PPIAL4EA0A075B759 164 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 PPIAL4DF5H284 164 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 HSPB6O14558 160 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 RAB3DO95716 219 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 HPXP02790 462 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 FCGR3AP08637 254 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 PPIAL4FP0DN26 164 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 GABRA2P47869 451 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 COL10A1Q03692 680 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 PRR31Q5SQ13 230 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 BRICD5Q6PL45 260 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 MOB1BQ7L9L4 216 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 PEG10Q86TG7 708 aaKnown RBP12.05□□□□□ -0.48
SHMT2-208ENST00000553868 CENPSQ8N2Z9 138 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 BEST4Q8NFU0 473 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 DNTTIP1Q9H147 329 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 DPAGT1Q9H3H5 408 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 ZNF286AQ9HBT8 521 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 BARX1Q9HBU1 254 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-208ENST00000553868 MYOZ1Q9NP98 299 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-208ENST00000553868 MCUBQ9NWR8 336 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 PPIAL4AQ9Y536 164 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 VWFP04275 2813 aa12.05□□□□□ -0.48
SHMT2-208ENST00000553868 TRBV6-6A0A0A6YYG2 114 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 DISC1C4P0D8 188 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 C3orf80F5H4A9 247 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 FSTL3O95633 263 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 CD74P04233 296 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 CD3DP04234 171 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 IFNA6P05013 189 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 HNF1AP20823 631 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 HLA-DMAP28067 261 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 OR3A3P47888 321 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 ARPC4P59998 168 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 ZMYND11Q15326 602 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 STUMQ69YW2 141 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 PLET1Q6UQ28 207 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 CLEC2AQ6UVW9 174 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 GDPD3Q7L5L3 318 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 BPIFB2Q8N4F0 458 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 ZNF561Q8N587 486 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 ZNF525Q8N782 197 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 GVQW1Q8N7I0 195 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 ASCC1Q8N9N2 400 aaKnown RBP12.04□□□□□ -0.48
SHMT2-208ENST00000553868 OR5H2Q8NGV7 314 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 OR4K15Q8NH41 348 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 ANGPTL6Q8NI99 470 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 MSI2Q96DH6 328 aaKnown RBP12.04□□□□□ -0.48
SHMT2-208ENST00000553868 SNX22Q96L94 193 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 PPA2Q9H2U2 334 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 ZNF665Q9H7R5 613 aa12.04□□□□□ -0.48
SHMT2-208ENST00000553868 TMEM165Q9HC07 324 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms