RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 RAP2BP61225 183 aa13.42□□□□□ -0.26
ACTN1-209ENST00000553659 GNG3P63215 75 aa13.42□□□□□ -0.26
ACTN1-209ENST00000553659 SURF2Q15527 256 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-209ENST00000553659 C4orf46Q504U0 113 aa13.42□□□□□ -0.26
ACTN1-209ENST00000553659 RGS7BPQ6MZT1 257 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-209ENST00000553659 LPCAT3Q6P1A2 487 aa13.42□□□□□ -0.26
ACTN1-209ENST00000553659 GVQW1Q8N7I0 195 aa13.42□□□□□ -0.26
ACTN1-209ENST00000553659 BEST4Q8NFU0 473 aa13.42□□□□□ -0.26
ACTN1-209ENST00000553659 OR4S1Q8NGB4 309 aa13.42□□□□□ -0.26
ACTN1-209ENST00000553659 OR13C8Q8NGS7 320 aa13.42□□□□□ -0.26
ACTN1-209ENST00000553659 EMG1Q92979 244 aaKnown RBP13.42□□□□□ -0.26
ACTN1-209ENST00000553659 SLC6A7Q99884 636 aa13.42□□□□□ -0.26
ACTN1-209ENST00000553659 SEC22CQ9BRL7 303 aa13.42□□□□□ -0.26
ACTN1-209ENST00000553659 PKIBQ9C010 78 aa13.42□□□□□ -0.26
ACTN1-209ENST00000553659 SLA2Q9H6Q3 261 aa13.42□□□□□ -0.26
ACTN1-209ENST00000553659 BEX1Q9HBH7 125 aa13.42□□□□□ -0.26
ACTN1-209ENST00000553659 MGAT4CQ9UBM8 478 aa13.42□□□□□ -0.26
ACTN1-209ENST00000553659 ELF5Q9UKW6 265 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-209ENST00000553659 CEACAM18A8MTB9 384 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 C17orf100A8MU93 164 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 TRIM77I1YAP6 450 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 WIPF1O43516 503 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 ANGPTL7O43827 346 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 PDCD6O75340 191 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 RGS11O94810 467 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 NGFP01138 241 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 OR4E1P0C645 316 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 RAC2P15153 192 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 C4BPBP20851 252 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 CHATP28329 748 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 HILS1P60008 231 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 GRK1Q15835 563 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 NKPD1Q17RQ9 610 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 MPV17LQ2QL34 196 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 ALKBH6Q3KRA9 238 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 ATPAF1Q5TC12 328 aaPredicted RBP13.41□□□□□ -0.26
ACTN1-209ENST00000553659 C1orf229Q6ZS94 237 aaPredicted RBP13.41□□□□□ -0.26
ACTN1-209ENST00000553659 RFPL4BQ6ZWI9 263 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 PEG10Q86TG7 708 aaKnown RBP13.41□□□□□ -0.26
ACTN1-209ENST00000553659 SLC25A42Q86VD7 318 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 C3orf56Q8N813 242 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 CAPSLQ8WWF8 208 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 OR5P3Q8WZ94 311 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 MICU1Q9BPX6 476 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 GON7Q9BXV9 100 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 POFUT1Q9H488 388 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 SPACA1Q9HBV2 294 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 TAAR3PQ9P1P4 343 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 ST3GAL6Q9Y274 331 aa13.41□□□□□ -0.26
ACTN1-209ENST00000553659 ARHGAP32A7KAX9 2087 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 IGLV3-9A0A075B6K5 115 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 ZNF732B4DXR9 585 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 TRAPPC2LH3BP13 241 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 FABP7O15540 132 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 AVPP01185 164 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 VSIG10L2P0DP72 767 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 ZNF250P15622 560 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 EGR1P18146 543 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 EPHA1P21709 976 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 FPR2P25090 351 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 SNU13P55769 128 aaKnown RBP13.4□□□□□ -0.26
ACTN1-209ENST00000553659 RBM11P57052 281 aaKnown RBP13.4□□□□□ -0.26
ACTN1-209ENST00000553659 FGF12P61328 243 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 PPP1CBP62140 327 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 NKAPLQ5M9Q1 402 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 OR52W1Q6IF63 320 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 SLC25A26Q70HW3 274 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 OR5AP2Q8NGF4 316 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 TERB2Q8NHR7 220 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 SGMS2Q8NHU3 365 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 HPSE2Q8WWQ2 592 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 JMJD8Q96S16 334 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 RTL8AQ9BWD3 113 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 BCL2L14Q9BZR8 327 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 PPA2Q9H2U2 334 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 ZNF665Q9H7R5 613 aa13.4□□□□□ -0.26
ACTN1-209ENST00000553659 IGKV1-12A0A0C4DH73 117 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 OR2A4O95047 310 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 PLATP00750 562 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 IGKV1D-12P01611 117 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 PMP2P02689 132 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 GLAP06280 429 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 FUT3P21217 361 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 HAAOP46952 286 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 KLF3P57682 345 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-209ENST00000553659 TSPAN5P62079 268 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 CCL8P80075 99 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 IL24Q13007 206 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 IL13RA2Q14627 380 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 HLXQ14774 488 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-209ENST00000553659 TAF9Q16594 264 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 SRSF7Q16629 238 aaKnown RBP eCLIP13.39□□□□□ -0.27
ACTN1-209ENST00000553659 NDUFA5Q16718 116 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 MICBQ29980 383 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 Q8IYB0 196 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 C12orf45Q8N5I9 185 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-209ENST00000553659 OR2AK2Q8NG84 335 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 OR2A7Q96R45 310 aa13.39□□□□□ -0.27
ACTN1-209ENST00000553659 CMSS1Q9BQ75 279 aaKnown RBP13.39□□□□□ -0.27
ACTN1-209ENST00000553659 LOC105371242A0A075B767 164 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms