RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ZNF729A6NN14 1252 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-206ENST00000553529 ADARB2-AS1A8MUL3 147 aa14.57□□□□□ -0.08
SHMT2-206ENST00000553529 BUB1B-PAK6H3BSN5 160 aa14.57□□□□□ -0.08
SHMT2-206ENST00000553529 OR7C1O76099 320 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-206ENST00000553529 AMY1AP04745 511 aa14.57□□□□□ -0.08
SHMT2-206ENST00000553529 AMY2AP04746 511 aa14.57□□□□□ -0.08
SHMT2-206ENST00000553529 ALDOBP05062 364 aa14.57□□□□□ -0.08
SHMT2-206ENST00000553529 IGHV3-43DP0DP04 118 aa14.57□□□□□ -0.08
SHMT2-206ENST00000553529 CELP19835 753 aa14.57□□□□□ -0.08
SHMT2-206ENST00000553529 CD34P28906 385 aa14.57□□□□□ -0.08
SHMT2-206ENST00000553529 BDH1Q02338 343 aa14.57□□□□□ -0.08
SHMT2-206ENST00000553529 ATAD3CQ5T2N8 411 aa14.57□□□□□ -0.08
SHMT2-206ENST00000553529 Q8N2B8 174 aa14.57□□□□□ -0.08
SHMT2-206ENST00000553529 STX19Q8N4C7 294 aa14.57□□□□□ -0.08
SHMT2-206ENST00000553529 WIPF2Q8TF74 440 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-206ENST00000553529 DERL3Q96Q80 235 aa14.57□□□□□ -0.08
SHMT2-206ENST00000553529 MYCBPQ99417 103 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-206ENST00000553529 METTL9Q9H1A3 318 aa14.57□□□□□ -0.08
SHMT2-206ENST00000553529 IDI2-AS1Q9NZ38 188 aa14.57□□□□□ -0.08
SHMT2-206ENST00000553529 DPM3Q9P2X0 92 aa14.57□□□□□ -0.08
SHMT2-206ENST00000553529 IRGMA1A4Y4 181 aa14.56□□□□□ -0.08
SHMT2-206ENST00000553529 EFCAB10A6NFE3 127 aa14.56□□□□□ -0.08
SHMT2-206ENST00000553529 CSF1P09603 554 aa14.56□□□□□ -0.08
SHMT2-206ENST00000553529 DYNLT3P51808 116 aa14.56□□□□□ -0.08
SHMT2-206ENST00000553529 YIF1BQ5BJH7 314 aa14.56□□□□□ -0.08
SHMT2-206ENST00000553529 GLIPR1L1Q6UWM5 242 aa14.56□□□□□ -0.08
SHMT2-206ENST00000553529 Q6ZTK2 550 aa14.56□□□□□ -0.08
SHMT2-206ENST00000553529 LYPD6Q86Y78 171 aa14.56□□□□□ -0.08
SHMT2-206ENST00000553529 JAGN1Q8N5M9 183 aa14.56□□□□□ -0.08
SHMT2-206ENST00000553529 NANOGP1Q8N7R0 232 aa14.56□□□□□ -0.08
SHMT2-206ENST00000553529 TMEM104Q8NE00 496 aa14.56□□□□□ -0.08
SHMT2-206ENST00000553529 CITED2Q99967 270 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-206ENST00000553529 RHOFQ9HBH0 211 aa14.56□□□□□ -0.08
SHMT2-206ENST00000553529 RAB18Q9NP72 206 aa14.56□□□□□ -0.08
SHMT2-206ENST00000553529 CHCHD3Q9NX63 227 aaKnown RBP14.56□□□□□ -0.08
SHMT2-206ENST00000553529 PSG11Q9UQ72 335 aa14.56□□□□□ -0.08
SHMT2-206ENST00000553529 MRPS28Q9Y2Q9 187 aaKnown RBP14.56□□□□□ -0.08
SHMT2-206ENST00000553529 A0A087X0M5 115 aa14.55□□□□□ -0.08
SHMT2-206ENST00000553529 A0A1B0GX30 115 aa14.55□□□□□ -0.08
SHMT2-206ENST00000553529 PTGES3LE9PB15 166 aa14.55□□□□□ -0.08
SHMT2-206ENST00000553529 G3V4G9 280 aa14.55□□□□□ -0.08
SHMT2-206ENST00000553529 MYL12BO14950 172 aa14.55□□□□□ -0.08
SHMT2-206ENST00000553529 IL1AP01583 271 aa14.55□□□□□ -0.08
SHMT2-206ENST00000553529 PRB2P02812 416 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-206ENST00000553529 FSTP19883 344 aa14.55□□□□□ -0.08
SHMT2-206ENST00000553529 WNT4P56705 351 aa14.55□□□□□ -0.08
SHMT2-206ENST00000553529 LIAT1Q6ZQX7 453 aa14.55□□□□□ -0.08
SHMT2-206ENST00000553529 FAM46BQ96A09 425 aa14.55□□□□□ -0.08
SHMT2-206ENST00000553529 OCSTAMPQ9BR26 566 aa14.55□□□□□ -0.08
SHMT2-206ENST00000553529 IL36GQ9NZH8 169 aa14.55□□□□□ -0.08
SHMT2-206ENST00000553529 CNOT2Q9NZN8 540 aaKnown RBP14.55□□□□□ -0.08
SHMT2-206ENST00000553529 OR6C3Q9NZP0 311 aa14.55□□□□□ -0.08
SHMT2-206ENST00000553529 HSPE1-MOB4S4R3N1 261 aa14.55□□□□□ -0.08
SHMT2-206ENST00000553529 A0A1W2PRX2 142 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 FUOMA2VDF0 154 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 ERICH4A6NGS2 130 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 NPIPB11E5RHQ5 1161 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 C15orf65H3BRN8 121 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 J3QR06 171 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 TOR1AO14656 332 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 SLC31A2O15432 143 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 LPLP06858 475 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 REG1BP48304 166 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 C2orf68Q2NKX9 166 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 ABCA11PQ4W5N1 156 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 TCTEX1D4Q5JR98 221 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 OR52W1Q6IF63 320 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 OR10K2Q6IF99 312 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 OR56B4Q8NH76 319 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 ZNF596Q8TC21 504 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 HAVCR2Q8TDQ0 301 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 SLC25A33Q9BSK2 321 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 WNT10AQ9GZT5 417 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 MMP28Q9H239 520 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 C8orf4Q9NR00 106 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 PLCXD1Q9NUJ7 323 aa14.54□□□□□ -0.08
SHMT2-206ENST00000553529 LSM2Q9Y333 95 aaKnown RBP14.54□□□□□ -0.08
SHMT2-206ENST00000553529 A0A1W2PPI3 338 aa14.53□□□□□ -0.08
SHMT2-206ENST00000553529 LEUTXA8MZ59 168 aa14.53□□□□□ -0.08
SHMT2-206ENST00000553529 FBXO24O75426 580 aa14.53□□□□□ -0.08
SHMT2-206ENST00000553529 GPX5O75715 221 aa14.53□□□□□ -0.08
SHMT2-206ENST00000553529 CSTBP04080 98 aaKnown RBP14.53□□□□□ -0.08
SHMT2-206ENST00000553529 CDK1P06493 297 aa14.53□□□□□ -0.08
SHMT2-206ENST00000553529 PDLIM3Q53GG5 364 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-206ENST00000553529 ARSJQ5FYB0 599 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-206ENST00000553529 AWAT2Q6E213 333 aa14.53□□□□□ -0.08
SHMT2-206ENST00000553529 SIGIRRQ6IA17 410 aa14.53□□□□□ -0.08
SHMT2-206ENST00000553529 DRAM1Q8N682 238 aa14.53□□□□□ -0.08
SHMT2-206ENST00000553529 OR4K15Q8NH41 348 aa14.53□□□□□ -0.08
SHMT2-206ENST00000553529 OR9G1Q8NH87 305 aa14.53□□□□□ -0.08
SHMT2-206ENST00000553529 TMED9Q9BVK6 235 aa14.53□□□□□ -0.08
SHMT2-206ENST00000553529 BARHL1Q9BZE3 327 aa14.53□□□□□ -0.08
SHMT2-206ENST00000553529 PRSS22Q9GZN4 317 aa14.53□□□□□ -0.08
SHMT2-206ENST00000553529 PRKDCP78527 4128 aaKnown RBP14.53□□□□□ -0.08
SHMT2-206ENST00000553529 IGHV3-72A0A0B4J1Y9 119 aa14.52□□□□□ -0.09
SHMT2-206ENST00000553529 SNRNP70P08621 437 aaKnown RBP14.52□□□□□ -0.09
SHMT2-206ENST00000553529 VDAC2P45880 294 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-206ENST00000553529 HNF4GQ14541 408 aa14.52□□□□□ -0.09
SHMT2-206ENST00000553529 NHLRC3Q5JS37 347 aa14.52□□□□□ -0.09
SHMT2-206ENST00000553529 C6orf141Q5SZD1 244 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms