RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 FAM90A24PP0C7X0 464 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 UBBP0CG47 229 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 CPEP16870 476 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 CD34P28906 385 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 PRRX1P54821 245 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 RELBQ01201 579 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 RBM39Q14498 530 aaKnown RBP12.43□□□□□ -0.42
SHMT2-204ENST00000553324 SSX2Q16385 188 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 ATAD3CQ5T2N8 411 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 LHFPL4Q7Z7J7 247 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 LYPD6Q86Y78 171 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 OR10A7Q8NGE5 316 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 NDNFQ8TB73 568 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 MGLLQ99685 303 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 CST11Q9H112 138 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 C16orf95Q9H693 158 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 LINC00574Q9H8X3 128 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 KIF25Q9UIL4 384 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 PITPNC1Q9UKF7 332 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 A0A087X0M5 115 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 A0A1B0GX30 115 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 TMEM30CPA0ZSE6 113 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 MCRIP1C9JLW8 97 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 DENRO43583 198 aaKnown RBP12.42□□□□□ -0.42
SHMT2-204ENST00000553324 MMP23AO75900 390 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 ARL6IP5O75915 188 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 GLAP06280 429 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 UCHL1P09936 223 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 CGB3P0DN86 165 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 CGB7P0DN87 165 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 DYNLT3P51808 116 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 ARHGDIBP52566 201 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 FAM189A2Q15884 450 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 PRAMEF5Q5TYX0 476 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 RSBN1Q5VWQ0 802 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-204ENST00000553324 SLC16A12Q6ZSM3 486 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 YTHDF1Q9BYJ9 559 aaKnown RBP12.42□□□□□ -0.42
SHMT2-204ENST00000553324 PPIL3Q9H2H8 161 aaKnown RBP12.42□□□□□ -0.42
SHMT2-204ENST00000553324 DPM3Q9P2X0 92 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 RNF114Q9Y508 228 aa12.42□□□□□ -0.42
SHMT2-204ENST00000553324 LEUTXA8MZ59 168 aa12.41□□□□□ -0.42
SHMT2-204ENST00000553324 CRTAPO75718 401 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-204ENST00000553324 CEACAM3P40198 252 aa12.41□□□□□ -0.42
SHMT2-204ENST00000553324 GLP1RP43220 463 aa12.41□□□□□ -0.42
SHMT2-204ENST00000553324 PSMD7P51665 324 aa12.41□□□□□ -0.42
SHMT2-204ENST00000553324 GABARAPL2P60520 117 aa12.41□□□□□ -0.42
SHMT2-204ENST00000553324 INSL4Q14641 139 aa12.41□□□□□ -0.42
SHMT2-204ENST00000553324 TBCEQ15813 527 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-204ENST00000553324 C17orf58Q2M2W7 97 aa12.41□□□□□ -0.42
SHMT2-204ENST00000553324 ZNF367Q7RTV3 350 aa12.41□□□□□ -0.42
SHMT2-204ENST00000553324 LINC01006Q8NI28 216 aa12.41□□□□□ -0.42
SHMT2-204ENST00000553324 NEK7Q8TDX7 302 aa12.41□□□□□ -0.42
SHMT2-204ENST00000553324 TAF15Q92804 592 aaKnown RBP eCLIP12.41□□□□□ -0.42
SHMT2-204ENST00000553324 TMEM203Q969S6 136 aa12.41□□□□□ -0.42
SHMT2-204ENST00000553324 SELENOIQ9C0D9 397 aa12.41□□□□□ -0.42
SHMT2-204ENST00000553324 RAB9BQ9NP90 201 aa12.41□□□□□ -0.42
SHMT2-204ENST00000553324 ACOT13Q9NPJ3 140 aa12.41□□□□□ -0.42
SHMT2-204ENST00000553324 CALYQ9NYX4 217 aa12.41□□□□□ -0.42
SHMT2-204ENST00000553324 A0A1W2PP11 408 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 NPIPB11E5RHQ5 1161 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 CA11O75493 328 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 IL1AP01583 271 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 CD37P11049 281 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 MGMTP16455 207 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 FUT3P21217 361 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 GABRA5P31644 462 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 GP2P55259 537 aaKnown RBP12.4□□□□□ -0.42
SHMT2-204ENST00000553324 LY6EQ16553 131 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 C1orf100Q5SVJ3 147 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 FAM27D1Q5T7N8 215 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 Q6ZSV7 163 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 LRRTM1Q86UE6 522 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 SVOPQ8N4V2 548 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 OR4P4Q8NGL7 312 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 OR13A1Q8NGR1 328 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 OR9G1Q8NH87 305 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 PLPPR1Q8TBJ4 325 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 PIFOQ8TCI5 191 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 MRGPRDQ8TDS7 321 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 KIRREL1Q96J84 757 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 RANBP3Q9H6Z4 567 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-204ENST00000553324 IDI2-AS1Q9NZ38 188 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 RCC2Q9P258 522 aaKnown RBP12.4□□□□□ -0.42
SHMT2-204ENST00000553324 HILPDAQ9Y5L2 63 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 PEX16Q9Y5Y5 336 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 TENM1Q9UKZ4 2725 aa12.4□□□□□ -0.42
SHMT2-204ENST00000553324 ORC5O43913 435 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 IGLV1-47P01700 117 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 MT-ND4P03905 459 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 NFYBP25208 207 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 HTR2CP28335 458 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 BRS3P32247 399 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 KIR2DS4P43632 304 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 MAP2K4P45985 399 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 RAB12Q6IQ22 244 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 CCDC144NLQ6NUI1 221 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 C11orf88Q6PI97 169 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 ZNF497Q6ZNH5 498 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 KCNG3Q8TAE7 436 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 Q96M66 194 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms